RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 VCXQ9H320 206 aa15.38■□□□□ 0.05
VIM-205ENST00000485947 EXOSC3Q9NQT5 275 aaKnown RBP15.38■□□□□ 0.05
VIM-205ENST00000485947 TNFRSF10DQ9UBN6 386 aa15.38■□□□□ 0.05
VIM-205ENST00000485947 Q9UFV3 132 aa15.38■□□□□ 0.05
VIM-205ENST00000485947 PRDM4Q9UKN5 801 aa15.38■□□□□ 0.05
VIM-205ENST00000485947 LINC01387J3KSC0 135 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 DVL2O14641 736 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 FADS1O60427 444 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 E2F6O75461 281 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 DIRAS1O95057 198 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 IL2RAP01589 272 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 UBL4AP11441 157 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 ZNF23P17027 643 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 EVI2BP34910 448 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 ZNF136P52737 540 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 NPTX1Q15818 432 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 EEF1A1P5Q5VTE0 462 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 HIPK1Q86Z02 1210 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 ZDHHC13Q8IUH4 622 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 DMRTC2Q8IXT2 367 aaPredicted RBP15.37■□□□□ 0.05
VIM-205ENST00000485947 OFCC1Q8IZS5 231 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 PACRGLQ8N7B6 248 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 FAM71CQ8NEG0 241 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 ZFP3Q96NJ6 502 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 UCN2Q96RP3 112 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 WFDC6Q9BQY6 131 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 OSBPL10Q9BXB5 764 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 TBL1XR1Q9BZK7 514 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 GALNT9Q9HCQ5 603 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 RLIMQ9NVW2 624 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 FLRT3Q9NZU0 649 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 KCNN3Q9UGI6 736 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 FOXD3Q9UJU5 478 aaPredicted RBP15.37■□□□□ 0.05
VIM-205ENST00000485947 OAZ3Q9UMX2 235 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 HIVEP1P15822 2718 aa15.37■□□□□ 0.05
VIM-205ENST00000485947 SAC3D1A6NKF1 404 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 J3KTA2 159 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 EIF4E2O60573 245 aaKnown RBP15.36■□□□□ 0.05
VIM-205ENST00000485947 GADD45GO95257 159 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 CHMP24386 653 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 HMGA2P52926 109 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 GAS1P54826 345 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 PLAURQ03405 335 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 GANABQ14697 944 aaKnown RBP15.36■□□□□ 0.05
VIM-205ENST00000485947 BCL2A1Q16548 175 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 WIPI1Q5MNZ9 446 aaPredicted RBP15.36■□□□□ 0.05
VIM-205ENST00000485947 SHQ1Q6PI26 577 aaKnown RBP15.36■□□□□ 0.05
VIM-205ENST00000485947 RBM45Q8IUH3 476 aaKnown RBP15.36■□□□□ 0.05
VIM-205ENST00000485947 EPHX4Q8IUS5 362 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 PIK3C3Q8NEB9 887 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 OR14L1PQ8NHC6 308 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 PHOSPHO1Q8TCT1 267 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 CNOT9Q92600 299 aaKnown RBP15.36■□□□□ 0.05
VIM-205ENST00000485947 WDYHV1Q96HA8 205 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 MCHR1Q99705 422 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 CIB1Q99828 191 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 ZNF559Q9BR84 538 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 UCK2Q9BZX2 261 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 LAT2Q9GZY6 243 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 ANKRD19PQ9H560 264 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 MCCC2Q9HCC0 563 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 TAS2R10Q9NYW0 307 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 A4GNTQ9UNA3 340 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 SAMHD1Q9Y3Z3 626 aaKnown RBP15.36■□□□□ 0.05
VIM-205ENST00000485947 TESMINQ9Y4I5 508 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 LYVE1Q9Y5Y7 322 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 MTORP42345 2549 aa15.36■□□□□ 0.05
VIM-205ENST00000485947 PDZD2O15018 2839 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 MBD3L4A6NDZ8 208 aaPredicted RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 MBD3L3A6NE82 208 aaPredicted RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 MBD3L5A6NJ08 208 aaPredicted RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 FAM90A27PA6NNH2 459 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 GTPBP1O00178 669 aaKnown RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 TNFRSF11BO00300 401 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 ZNF264O43296 627 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 FRS3O43559 492 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 NDUFB5O43674 189 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 OR5F1O95221 314 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 IL18BPO95998 194 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 H1F0P07305 194 aaKnown RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 THRBP10828 461 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 YAP1P46937 504 aaKnown RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 CDH12P55289 794 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 GFRA1P56159 465 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 DSCR4P56555 118 aaPredicted RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 ST3GAL3Q11203 375 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 KRTAP21-3Q3LHN1 58 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 FBXL19-AS1Q494R0 122 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 ENTPD8Q5MY95 495 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 DESI1Q6ICB0 168 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 PPP4R4Q6NUP7 873 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 ZBTB49Q6ZSB9 765 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 PLEKHM3Q6ZWE6 761 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 TOR1AIP2Q8NFQ8 470 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 MBD3L2Q8NHZ7 208 aaPredicted RBP15.35■□□□□ 0.05
VIM-205ENST00000485947 LURAP1Q96LR2 239 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 FNDC11Q9BVV2 318 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 GABARAPL1Q9H0R8 117 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 PTGES2Q9H7Z7 377 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 NPDC1Q9NQX5 325 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms