RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 STK35Q8TDR2 534 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 SLC41A3Q96GZ6 507 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 ZNF845Q96IR2 970 aaPredicted RBP17.88■□□□□ 0.45
COL6A2-208ENST00000485591 MPP4Q96JB8 637 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 ARL5BQ96KC2 179 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 C7orf34Q96L11 122 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 TRIB1Q96RU8 372 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 CALHM2Q9HA72 323 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 SLC7A7Q9UM01 511 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 A4GNTQ9UNA3 340 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 ZNF175Q9Y473 711 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 ENPP4Q9Y6X5 453 aa17.88■□□□□ 0.45
COL6A2-208ENST00000485591 RP1L1Q8IWN7 2480 aaPredicted RBP17.88■□□□□ 0.45
COL6A2-208ENST00000485591 ZC3H12DA2A288 527 aaKnown RBP17.87■□□□□ 0.45
COL6A2-208ENST00000485591 CXCL13O43927 109 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 NPIPB7O75200 414 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 IFNA8P32881 189 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 VLDLRP98155 873 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 MYBPHQ13203 477 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 SGCBQ16585 318 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 C5orf46Q6UWT4 87 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 LINC00114Q6XXX2 140 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 TMPPEQ6ZT21 453 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 FJX1Q86VR8 437 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 LSRQ86X29 649 aaPredicted RBP17.87■□□□□ 0.45
COL6A2-208ENST00000485591 OFCC1Q8IZS5 231 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 RNF217Q8TC41 542 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 CPNE4Q96A23 557 aaPredicted RBP17.87■□□□□ 0.45
COL6A2-208ENST00000485591 ZNF300Q96RE9 604 aaPredicted RBP17.87■□□□□ 0.45
COL6A2-208ENST00000485591 TTYH2Q9BSA4 534 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 POTEKPQ9BYX7 375 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 MAGIXQ9H6Y5 334 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 TIGARQ9NQ88 270 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 NDUFAF4Q9P032 175 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 RIMS3Q9UJD0 308 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 DOCK7Q96N67 2140 aa17.87■□□□□ 0.45
COL6A2-208ENST00000485591 IGKV1D-42A0A075B6H8 117 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 MBD3L4A6NDZ8 208 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-208ENST00000485591 MBD3L3A6NE82 208 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-208ENST00000485591 MBD3L5A6NJ08 208 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-208ENST00000485591 KDM4EB2RXH2 506 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-208ENST00000485591 J3KTA2 159 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 LRRTM2O43300 516 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 PRSS23O95084 383 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 PMS2P2O95744 297 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 ITGA2P17301 1181 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 DIO1P49895 249 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 CARD18P57730 90 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 RAC3P60763 192 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 CSNK2A1P68400 391 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-208ENST00000485591 EGR4Q05215 589 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 ST3GAL3Q11203 375 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 IQCCQ4KMZ1 466 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 TMEM211Q6ICI0 200 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 WDR88Q6ZMY6 472 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 CYP4Z1Q86W10 505 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 MARVELD2Q8N4S9 558 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 MBD3L2Q8NHZ7 208 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-208ENST00000485591 OSTF1Q92882 214 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 UTP4Q969X6 686 aaKnown RBP17.86■□□□□ 0.45
COL6A2-208ENST00000485591 PRSS27Q9BQR3 290 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 TMEM43Q9BTV4 400 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 ZNF426Q9BUY5 554 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 SRXN1Q9BYN0 137 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 IL1RAPQ9NPH3 570 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 SLC5A6Q9Y289 635 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 TRAPPC4Q9Y296 219 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 HIVEP3Q5T1R4 2406 aa17.86■□□□□ 0.45
COL6A2-208ENST00000485591 SLC22A20A6NK97 555 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 hCG_2039718K7EN88 272 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 SULT2B1O00204 365 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 FFAR1O14842 300 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 DNPH1O43598 174 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 FABP3P05413 133 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 GLI4P10075 376 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 IMPDH2P12268 514 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 FCGR2AP12318 317 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 RHCEP18577 417 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 IDUAP35475 653 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 YAP1P46937 504 aaKnown RBP17.85■□□□□ 0.45
COL6A2-208ENST00000485591 NCOA6Q14686 2063 aaPredicted RBP17.85■□□□□ 0.45
COL6A2-208ENST00000485591 PON3Q15166 354 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 ZNF239Q16600 458 aaKnown RBP17.85■□□□□ 0.45
COL6A2-208ENST00000485591 C1orf140Q5VVS0 124 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 MTFR2Q6P444 385 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 SEM1Q6ZVN7 128 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 WNT2BQ93097 391 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 SEPHS2Q99611 448 aa17.85■□□□□ 0.45
COL6A2-208ENST00000485591 MCTS1Q9ULC4 181 aaKnown RBP17.85■□□□□ 0.45
COL6A2-208ENST00000485591 FAM32AQ9Y421 112 aaKnown RBP17.85■□□□□ 0.45
COL6A2-208ENST00000485591 AHSA1O95433 338 aa17.84■□□□□ 0.45
COL6A2-208ENST00000485591 SYNGR4O95473 234 aa17.84■□□□□ 0.45
COL6A2-208ENST00000485591 UMPSP11172 480 aa17.84■□□□□ 0.45
COL6A2-208ENST00000485591 TIMP3P35625 211 aa17.84■□□□□ 0.45
COL6A2-208ENST00000485591 RBM34P42696 430 aaKnown RBP17.84■□□□□ 0.45
COL6A2-208ENST00000485591 MAGEA2P43356 314 aa17.84■□□□□ 0.45
COL6A2-208ENST00000485591 NUP107P57740 925 aa17.84■□□□□ 0.45
COL6A2-208ENST00000485591 FAM98BQ52LJ0 330 aaKnown RBP17.84■□□□□ 0.45
COL6A2-208ENST00000485591 PIWIL3Q7Z3Z3 882 aaKnown RBP17.84■□□□□ 0.45
COL6A2-208ENST00000485591 ZDHHC21Q8IVQ6 265 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms