RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 B4GALNT2Q8NHY0 566 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 PIGXQ8TBF5 258 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TEX47Q8TBZ9 253 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 SLC7A13Q8TCU3 470 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 ABHD5Q8WTS1 349 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 CHPT1Q8WUD6 406 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 OIT3Q8WWZ8 545 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 SGCDQ92629 289 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 OSTF1Q92882 214 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 RFKQ969G6 155 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 C5orf34Q96MH7 638 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 OR2A14Q96R47 310 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 OR7D2Q96RA2 312 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 RPP25Q9BUL9 199 aaKnown RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 AICDAQ9GZX7 198 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 PIGUQ9H490 435 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 SERHL2Q9H4I8 314 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 SYNDIG1Q9H7V2 258 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 UCK1Q9HA47 277 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 DUSP22Q9NRW4 184 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 C14orf105Q9NVL8 296 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 FAIMQ9NVQ4 179 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 MRPS18AQ9NVS2 196 aaKnown RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 CRNNQ9UBG3 495 aaPredicted RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 PILRAQ9UKJ1 303 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNX13-208ENST00000482558 PEX16Q9Y5Y5 336 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TICRRQ7Z2Z1 1910 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 TCRBV21S2A2A0A5A6 115 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 HTR3EA5X5Y0 456 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 WASHC1A8K0Z3 465 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 BTN3A3O00478 584 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 SLC25A17O43808 307 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 SRPX2O60687 465 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 CYP7B1O75881 506 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 ZBTB11O95625 1053 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 GPR75O95800 540 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 CER1O95813 267 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 CHRM4P08173 479 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 STSP08842 583 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 ZNF888P0CJ79 500 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 ADORA3P0DMS8 318 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 CPMP14384 443 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 FPR3P25089 353 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 PSMA1P25786 263 aaKnown RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 POU1F1P28069 291 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 AVPR2P30518 371 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 TGFBR2P37173 567 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 FEN1P39748 380 aaKnown RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 PCYT1AP49585 367 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 CAPZA1P52907 286 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 RAB8AP61006 207 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 UBE2IP63279 158 aaKnown RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 CDK5Q00535 292 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 RAB40BQ12829 278 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 DUSP8Q13202 625 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 AQP6Q13520 282 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 HYAL4Q2M3T9 481 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 ZNF750Q32MQ0 723 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 ZNF404Q494X3 552 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 PLA1AQ53H76 456 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 ARMCX4Q5H9R4 360 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 MFSD12Q6NUT3 480 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 SLC27A4Q6P1M0 643 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 PODNL1Q6PEZ8 512 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 C19orf48Q6RUI8 117 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 Q6ZSR6 202 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 LACC1Q8IV20 430 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 AMER3Q8N944 861 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 DRAXINQ8NBI3 349 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 OR52P1PQ8NH57 321 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 RPLP0P6Q8NHW5 317 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 VANGL1Q8TAA9 524 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 FLVCR1-AS1Q8TAF5 88 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 ACOT11Q8WXI4 607 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 TSACCQ96A04 125 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 C10orf90Q96M02 699 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 ZNF578Q96N58 590 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 MGLLQ99685 303 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 COQ7Q99807 217 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 SYT3Q9BQG1 590 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 TINAGL1Q9GZM7 467 aaPredicted RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 NXF2Q9GZY0 626 aaKnown RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 TMEM168Q9H0V1 697 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 DCSTAMPQ9H295 470 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 SLC38A1Q9H2H9 487 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 SCPEP1Q9HB40 452 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 AKIP1Q9NQ31 210 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 SLC2A4RGQ9NR83 387 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 GPR83Q9NYM4 423 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 CD207Q9UJ71 328 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 DIMT1Q9UNQ2 313 aaKnown RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 MRPS33Q9Y291 106 aaKnown RBP7.1□□□□□ -1.27
SNX13-208ENST00000482558 UGT2A1Q9Y4X1 527 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 CLDN16Q9Y5I7 305 aa7.1□□□□□ -1.27
SNX13-208ENST00000482558 A0A075B6Q4 140 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 A0A0G2JN53 185 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 SPTY2D1-AS1A0A0U1RR47 76 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 OR6C74A6NCV1 312 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms