RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 C11orf87Q6NUJ2 197 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 RFPL4BQ6ZWI9 263 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 MOB2Q70IA6 237 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 ABHD13Q7L211 337 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 ASCL5Q7RTU5 278 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 SMIM15Q7Z3B0 74 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 C5orf24Q7Z6I8 188 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 SATL1Q86VE3 508 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.65□□□□□ -1.83
VPS41-212ENST00000482217 LINC00518Q8N0U6 118 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 METTL4Q8N3J2 472 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.65□□□□□ -1.83
VPS41-212ENST00000482217 CCDC71LQ8N9Z2 235 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 INO80EQ8NBZ0 244 aaPredicted RBP3.65□□□□□ -1.83
VPS41-212ENST00000482217 NOA1Q8NC60 698 aaKnown RBP3.65□□□□□ -1.83
VPS41-212ENST00000482217 OR56A4Q8NGH8 313 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 OR52I1Q8NGK6 324 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 OR4A4PQ8NGN8 299 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 LGALS14Q8TCE9 139 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 LRRC15Q8TF66 581 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 SLC38A5Q8WUX1 472 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 PYDC1Q8WXC3 89 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 BAALCQ8WXS3 180 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 TMEM37Q8WXS4 190 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 TM9SF4Q92544 642 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 HIST1H2ACQ93077 130 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 MYDGFQ969H8 173 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 TMEM143Q96AN5 459 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 TMEM18Q96B42 140 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 AGAP4Q96P64 663 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 AGPAT1Q99943 283 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 CCDC3Q9BQI4 270 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 LRRC2Q9BYS8 371 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 SLITRK2Q9H156 845 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 SEMA6AQ9H2E6 1030 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 ANKRD19PQ9H560 264 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 BEX1Q9HBH7 125 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 XPNPEP1Q9NQW7 623 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 GSN-AS1Q9NRJ2 163 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 ECHDC1Q9NTX5 307 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 INTS9Q9NV88 658 aaKnown RBP3.65□□□□□ -1.83
VPS41-212ENST00000482217 NLE1Q9NVX2 485 aaPredicted RBP3.65□□□□□ -1.83
VPS41-212ENST00000482217 C1orf123Q9NWV4 160 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 CMTM6Q9NX76 183 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 GPR83Q9NYM4 423 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 MAT2BQ9NZL9 334 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 KIF25Q9UIL4 384 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 ERVW-1Q9UQF0 538 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 PPP1R3CQ9UQK1 317 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 SLC22A13Q9Y226 551 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 NSG2Q9Y328 171 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 RAI2Q9Y5P3 530 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 PCDH11YQ9BZA8 1340 aa3.65□□□□□ -1.83
VPS41-212ENST00000482217 PNPLA6Q8IY17 1366 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 VSTM2BA6NLU5 285 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 OR2AT4A6NND4 320 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 GOSR2O14653 212 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 IMPA2O14732 288 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 CASKO14936 926 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 SGCEO43556 437 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 PI15O43692 258 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ZMPSTE24O75844 475 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TMEM50AO95807 157 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 EML2O95834 649 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 WDPCPO95876 746 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 SYF2O95926 243 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 TNNC2P02585 160 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 FGF2P09038 288 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ZNF23P17027 643 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 EFNA1P20827 205 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 BGNP21810 368 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 GCKP35557 465 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 PPP3CCP48454 512 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 IDH2P48735 452 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 NOVA1P51513 510 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 PRELPP51888 382 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TMEM50BP56557 158 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TMPRSS3P57727 454 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 RPS15AP62244 130 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 ZP4Q12836 540 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 MYBPHQ13203 477 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TFDP1Q14186 410 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 KRT81Q14533 505 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 MTF1Q14872 753 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 PTGR1Q14914 329 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ARL6IP1Q15041 203 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TAF1AQ15573 450 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 GUK1Q16774 197 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ZNF542PQ5EBM4 170 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ACER2Q5QJU3 275 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 C22orf42Q6IC83 251 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 PAQR6Q6TCH4 344 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 NUFIP2Q7Z417 695 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 GOLGA7Q7Z5G4 137 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ERI1Q8IV48 349 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 PGAM4Q8N0Y7 254 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 RELL2Q8NC24 303 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 ZNF548Q8NEK5 533 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 OR4K2Q8NGD2 314 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 OR5B17Q8NGF7 314 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms