RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FAM98AQ8NCA5 519 aaKnown RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 GPBAR1Q8TDU6 330 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 RIT1Q92963 219 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 PGLYRP3Q96LB9 341 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 STACQ99469 402 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 MARVELD1Q9BSK0 173 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 TRIM36Q9NQ86 728 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 SLC35A3Q9Y2D2 325 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 TMEM184BQ9Y519 407 aaPredicted RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 SPACA6W5XKT8 324 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 A0A0G2JK05 382 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 MT-ND5P03915 603 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 PPM1FP49593 454 aaPredicted RBP9.93□□□□□ -0.82
VPS52-217ENST00000478934 GZMKP49863 264 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 CCR6P51684 374 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 FZD2Q14332 565 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 TMEM44Q2T9K0 475 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 ACSM3Q53FZ2 586 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 TOR1AIP2Q8NFQ8 470 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 GRPEL2Q8TAA5 225 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 ASB12Q8WXK4 309 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 TOE1Q96GM8 510 aaKnown RBP9.93□□□□□ -0.82
VPS52-217ENST00000478934 NMNAT3Q96T66 252 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 CDCA3Q99618 268 aaPredicted RBP9.93□□□□□ -0.82
VPS52-217ENST00000478934 PDCD1LG2Q9BQ51 273 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 NDC1Q9BTX1 674 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 CDCP1Q9H5V8 836 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 POLHQ9Y253 713 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 SHISA7A6NL88 538 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 NOTOA8MTQ0 251 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 MEN1O00255 615 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 TNFRSF10CO14798 259 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 FABP7O15540 132 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 FOXS1O43638 330 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 CHP2O43745 196 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 ORC5O43913 435 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 SELENOFO60613 162 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 OR2B3O76000 313 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 TRAPPC2P0DI81 140 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 TRAPPC2BP0DI82 140 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 THEGLP0DJG4 465 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 BTCP35070 178 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 DGCR2P98153 550 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 STX4Q12846 297 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 HBMQ6B0K9 141 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 ZNF321PQ8N8H1 164 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 ZFAND1Q8TCF1 268 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 TRIM63Q969Q1 353 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 RFT1Q96AA3 541 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 DACT3Q96B18 629 aaPredicted RBP9.93□□□□□ -0.82
VPS52-217ENST00000478934 AHCYL2Q96HN2 611 aaKnown RBP9.93□□□□□ -0.82
VPS52-217ENST00000478934 TSSK2Q96PF2 358 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 MAP3K3Q99759 626 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 JAM3Q9BX67 310 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 KCNN2Q9H2S1 579 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 SLC23A1Q9UHI7 598 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 ZNF222Q9UK12 451 aa9.93□□□□□ -0.82
VPS52-217ENST00000478934 FRYLO94915 3013 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 OR5K3A6NET4 321 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 SLC22A31A6NKX4 558 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 OIP5O43482 229 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 FZD7O75084 574 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ADRB1P08588 477 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 SLC35E2P0CK97 266 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 LTBRP36941 435 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 TALDO1P37837 337 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 MTNR1BP49286 362 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 RAB38P57729 211 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 MCATQ8IVS2 390 aaKnown RBP9.92□□□□□ -0.82
VPS52-217ENST00000478934 TCTE3Q8IZS6 198 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 RASD2Q96D21 266 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 RBM18Q96H35 190 aaKnown RBP9.92□□□□□ -0.82
VPS52-217ENST00000478934 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 SLA2Q9H6Q3 261 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 CYSLTR2Q9NS75 346 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ING3Q9NXR8 418 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 COPS3Q9UNS2 423 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ERVK-19Q9WJR5 959 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 AK6Q9Y3D8 172 aaKnown RBP9.92□□□□□ -0.82
VPS52-217ENST00000478934 CLDN16Q9Y5I7 305 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 SEC16AO15027 2179 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 A0A1B0GVT2 93 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ANKRD61A6NGH8 418 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 PRR32B1ATL7 298 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 PLPP2O43688 288 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 CTSEP14091 401 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ZNF3P17036 446 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 HK1P19367 917 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 CXCL3P19876 107 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 GIFP27352 417 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 PITPNBP48739 271 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ERVK-25P63136 954 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 NTRK2Q16620 822 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ZNF613Q6PF04 617 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 RTL4Q6ZR62 310 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 ARHGEF39Q8N4T4 335 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 OR6C4Q8NGE1 309 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 AKAP1Q92667 903 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS52-217ENST00000478934 ZC3HAV1LQ96H79 300 aaKnown RBP9.92□□□□□ -0.82
VPS52-217ENST00000478934 POT1Q9NUX5 634 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms