RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ENPEPQ07075 957 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SLC10A7Q0GE19 358 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 DUSP7Q16829 419 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 DGUOKQ16854 277 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SLC22A6Q4U2R8 563 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 EIPR1Q53HC9 387 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 CARD16Q5EG05 197 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 XKR7Q5GH72 579 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 RNLSQ5VYX0 342 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 RNASEKQ6P5S7 137 aaKnown RBP3.92□□□□□ -1.78
UPF3B-203ENST00000478840 NAXDQ8IW45 347 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SKA3Q8IX90 412 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.92□□□□□ -1.78
UPF3B-203ENST00000478840 OR52H1Q8NGJ2 320 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 OR1L6Q8NGR2 347 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 OR56B4Q8NH76 319 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 HAVCR1Q96D42 359 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 CXorf40BQ96DE9 158 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 MS4A14Q96JA4 679 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SERAC1Q96JX3 654 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 CNN2Q99439 309 aaKnown RBP3.92□□□□□ -1.78
UPF3B-203ENST00000478840 RNF2Q99496 336 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 C19orf24Q9BVV8 132 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 FAM192AQ9GZU8 254 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 GLRX2Q9NS18 164 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 KLHL28Q9NXS3 571 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SLC7A8Q9UHI5 535 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 PLLPQ9Y342 182 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 SNED1Q8TER0 1413 aa3.92□□□□□ -1.78
UPF3B-203ENST00000478840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.91□□□□□ -1.78
UPF3B-203ENST00000478840 CACNA1FO60840 1977 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 IGKV3D-15A0A087WSY6 115 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 A0A087WWV3 80 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 TCRBV9S1A1TA0A576 114 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 H0YIV9 168 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 KIF2AO00139 706 aaPredicted RBP3.91□□□□□ -1.78
UPF3B-203ENST00000478840 HSD17B6O14756 317 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 ZNF354AO60765 605 aaPredicted RBP3.91□□□□□ -1.78
UPF3B-203ENST00000478840 TMEM50AO95807 157 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 TBX6O95947 436 aaPredicted RBP3.91□□□□□ -1.78
UPF3B-203ENST00000478840 FGF4P08620 206 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 KITLGP21583 273 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 ZP3P21754 424 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 HOXD10P28358 340 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 CALCRP30988 508 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 GCKP35557 465 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 VEGFCP49767 419 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 PPP1R7Q15435 360 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 Q1RN00 199 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 RAET1LQ5VY80 246 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 CGB2Q6NT52 195 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 DNM1P46Q6ZS02 220 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 STXBP4Q6ZWJ1 553 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 GDPD3Q7L5L3 318 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 BIVMQ86UB2 503 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 OR4C5Q8NGB2 326 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 FAM110BQ8TC76 370 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 ZPLD1Q8TCW7 415 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 UFD1Q92890 307 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 SEC22AQ96IW7 307 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 IFT74Q96LB3 600 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 NOL4LQ96MY1 436 aaPredicted RBP3.91□□□□□ -1.78
UPF3B-203ENST00000478840 OXGR1Q96P68 337 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 FMO2Q99518 471 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 CHP1Q99653 195 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 MAPKAP1Q9BPZ7 522 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 RNF126Q9BV68 326 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 NEK6Q9HC98 313 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 PAK5Q9P286 719 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 CNTNAP2Q9UHC6 1331 aa3.91□□□□□ -1.78
UPF3B-203ENST00000478840 IGHV1OR15-1A0A075B7D0 117 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 IQANK1A0A1B0GTG1 560 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 SMIM28A0A1B0GU29 152 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 A8MXQ7 604 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 GFYI3L273 518 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 DCTN6O00399 190 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 ABCD4O14678 606 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 RNF13O43567 381 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 ZNF254O75437 659 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 CAPN2P17655 700 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 NPR2P20594 1047 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 IL12AP29459 219 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 VHLP40337 213 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 PKNOX1P55347 436 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 TGM3Q08188 693 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 PPIL2Q13356 520 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 ARHGAP19Q14CB8 494 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 OXA1LQ15070 435 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 LRRC36Q1X8D7 754 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 TIMM50Q3ZCQ8 353 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 HIGD2BQ4VC39 106 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 OR2B11Q5JQS5 317 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
UPF3B-203ENST00000478840 SPANXN2Q5MJ10 180 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 GPRC6AQ5T6X5 926 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 OR2G6Q5TZ20 316 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 WDR74Q6RFH5 385 aaPredicted RBP3.9□□□□□ -1.79
UPF3B-203ENST00000478840 PSTKQ8IV42 348 aaKnown RBP3.9□□□□□ -1.79
UPF3B-203ENST00000478840 CCDC65Q8IXS2 484 aa3.9□□□□□ -1.79
UPF3B-203ENST00000478840 CADM2Q8N3J6 435 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms