RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PAMR1Q6UXH9 720 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 POMGNT2Q8NAT1 580 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 OR5M3Q8NGP4 307 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 ST6GAL2Q96JF0 529 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 CCNL2Q96S94 520 aaPredicted RBP15.1■□□□□ 0.01
TMEM53-208ENST00000476724 SLC38A3Q99624 504 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 KCNJ15Q99712 375 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 TTYH2Q9BSA4 534 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 IER2Q9BTL4 223 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.1■□□□□ 0.01
TMEM53-208ENST00000476724 ZMIZ1Q9ULJ6 1067 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 N6AMT1Q9Y5N5 214 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 TECTAO75443 2155 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 A0A087WUJ7 227 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 SYNDIG1LA6NDD5 238 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 TGFBR3LH3BV60 316 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 SC5DO75845 299 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 SERPINA3P01011 423 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 MRPL3P09001 348 aaKnown RBP15.1■□□□□ 0.01
TMEM53-208ENST00000476724 OR2T7P0C7T2 308 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 CT45A8P0DMV1 189 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 CT45A9P0DMV2 189 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 HLA-DMAP28067 261 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 NR4A2P43354 598 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 INPP1P49441 399 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 LGALS3BPQ08380 585 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 NDUFA5Q16718 116 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.1■□□□□ 0.01
TMEM53-208ENST00000476724 CT45A2Q5DJT8 189 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 FCRLBQ6BAA4 426 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 DMKNQ6E0U4 476 aaPredicted RBP15.1■□□□□ 0.01
TMEM53-208ENST00000476724 NPSR1Q6W5P4 371 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 MAMSTRQ6ZN01 415 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 PXKQ7Z7A4 578 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 SYS1Q8N2H4 156 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 CYB561A3Q8NBI2 242 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 OR2T27Q8NH04 317 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF285Q96NJ3 590 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 RBCK1Q9BYM8 510 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 PRODH2Q9UF12 536 aa15.1■□□□□ 0.01
TMEM53-208ENST00000476724 SERINC4A6NH21 518 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 CENPXA8MT69 81 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 CSTAP01040 98 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 CLUP10909 449 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 TDGF1P13385 188 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 SHC1P29353 583 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 TALDO1P37837 337 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 CAPZBP47756 277 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 DHPSP49366 369 aaPredicted RBP15.09■□□□□ 0.01
TMEM53-208ENST00000476724 OR12D2P58182 307 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 ACTA2P62736 377 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 ACTG2P63267 376 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 SERTAD2Q14140 314 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 GGTLC2Q14390 218 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 ISXQ2M1V0 245 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 FAAH2Q6GMR7 532 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 OGFOD3Q6PK18 319 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 KIRREL2Q6UWL6 708 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 DPY19L2P2Q6ZN68 376 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 CEACAM19Q7Z692 300 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 OR52E2Q8NGJ4 325 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 MAP3K3Q99759 626 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 SLC19A3Q9BZV2 496 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 OR10A5Q9H207 317 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 CYSLTR2Q9NS75 346 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 PLCL2Q9UPR0 1127 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 OR10H1Q9Y4A9 318 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 CLDN16Q9Y5I7 305 aa15.09■□□□□ 0.01
TMEM53-208ENST00000476724 E9PI62 339 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 HRKO00198 91 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 LYRM1O43325 122 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 PROS1P07225 676 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 ELK1P19419 428 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 HOXD12P35452 270 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 MLLT3P42568 568 aaPredicted RBP15.08■□□□□ 0.01
TMEM53-208ENST00000476724 NKX2-5P52952 324 aaPredicted RBP15.08■□□□□ 0.01
TMEM53-208ENST00000476724 SLC3A1Q07837 685 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 SIGLEC14Q08ET2 396 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 TBRG1Q3YBR2 411 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 ZFP69Q49AA0 526 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 TRILQ7L0X0 811 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 SLC25A45Q8N413 288 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 BCORP1Q8N888 145 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 FAM98AQ8NCA5 519 aaKnown RBP15.08■□□□□ 0.01
TMEM53-208ENST00000476724 C16orf52Q8NHV5 167 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 SLC7A6Q92536 515 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 MRPL48Q96GC5 212 aaKnown RBP15.08■□□□□ 0.01
TMEM53-208ENST00000476724 PGLYRP3Q96LB9 341 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.08■□□□□ 0.01
TMEM53-208ENST00000476724 DDX28Q9NUL7 540 aaKnown RBP15.08■□□□□ 0.01
TMEM53-208ENST00000476724 EXTL2Q9UBQ6 330 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 MALT1Q9UDY8 824 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 DTX4Q9Y2E6 619 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 NPFFR2Q9Y5X5 522 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 PI4KAP42356 2102 aa15.08■□□□□ 0.01
TMEM53-208ENST00000476724 LILRA5A6NI73 299 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 RGS13O14921 159 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 ARPC3O15145 178 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 OGG1O15527 345 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 IDH3BO43837 385 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms