RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 OIT3Q8WWZ8 545 aa12.62□□□□□ -0.39
COL2A1-205ENST00000474996 MUS81Q96NY9 551 aa12.62□□□□□ -0.39
COL2A1-205ENST00000474996 TNFRSF13CQ96RJ3 184 aa12.62□□□□□ -0.39
COL2A1-205ENST00000474996 SAP130Q9H0E3 1048 aa12.62□□□□□ -0.39
COL2A1-205ENST00000474996 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
COL2A1-205ENST00000474996 MALT1Q9UDY8 824 aa12.62□□□□□ -0.39
COL2A1-205ENST00000474996 DNPH1O43598 174 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 SCN2BO60939 215 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 GUSBP08236 651 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 UQCRC2P22695 453 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 MAGEA8P43361 318 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 IDH2P48735 452 aaKnown RBP12.61□□□□□ -0.39
COL2A1-205ENST00000474996 PHC1P78364 1004 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 KCNJ10P78508 379 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 IFFO1Q0D2I5 559 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 SMU1Q2TAY7 513 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 C9orf135Q5VTT2 229 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 SAXO2Q658L1 398 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 OR7E24Q6IFN5 339 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 CASP12Q6UXS9 341 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 DEPDC4Q8N2C3 294 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 ARFGAP2Q8N6H7 521 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 INPP5KQ9BT40 448 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 DPY30Q9C005 99 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 MANSC1Q9H8J5 431 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 AKTIPQ9H8T0 292 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 EXOSC3Q9NQT5 275 aaKnown RBP12.61□□□□□ -0.39
COL2A1-205ENST00000474996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.61□□□□□ -0.39
COL2A1-205ENST00000474996 TMEM181Q9P2C4 612 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 ATP23Q9Y6H3 246 aa12.61□□□□□ -0.39
COL2A1-205ENST00000474996 PRSS51A0A1B0GVH4 220 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 PRAMEF27A3QJZ7 478 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ELOA3DA6NLF2 546 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 PDLIM1O00151 329 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 AP3D1O14617 1153 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 TYROBPO43914 113 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 SASH3O75995 380 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 C1QCP02747 245 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 FKBP2P26885 142 aaKnown RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ETV4P43268 484 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 CLK1P49759 484 aaKnown RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 KHKP50053 298 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 H3F3AP84243 136 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ELOA3BQ3SY89 546 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 GPAT3Q53EU6 434 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ANXA8L1Q5VT79 327 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 AP1ARQ63HQ0 302 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 NUDCD3Q8IVD9 361 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ZNF781Q8N8C0 355 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 WDR31Q8NA23 367 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ELOA3Q8NG57 546 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 TMEM158Q8WZ71 300 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 FAM168AQ92567 244 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 CNOT9Q92600 299 aaKnown RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ZIM3Q96PE6 472 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 SLC35A5Q9BS91 424 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ROPN1BQ9BZX4 212 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ROPN1Q9HAT0 212 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
COL2A1-205ENST00000474996 MARCOQ9UEW3 520 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-205ENST00000474996 ARFGEF3Q5TH69 2177 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 TMED7-TICAM2A0A0A6YYA0 188 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 TMEM72A0PK05 275 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 WDR91A4D1P6 747 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 H7C417 338 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-205ENST00000474996 FAM157CP0CG43 387 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 IMPDH2P12268 514 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 SLC25A16P16260 332 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 CHI3L1P36222 383 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-205ENST00000474996 SLC35A1P78382 337 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 HPCAP84074 193 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 VLDLRP98155 873 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 SLC25A3Q00325 362 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 SPANXN4Q5MJ08 99 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 CROCCP2Q86T23 111 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 VPS37AQ8NEZ2 397 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 TESCQ96BS2 214 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 AMBRA1Q9C0C7 1298 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 SLC17A5Q9NRA2 495 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 UPB1Q9UBR1 384 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 OSGIN1Q9UJX0 560 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 CDC42EP3Q9UKI2 254 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 TRAPPC4Q9Y296 219 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 SLC9A8Q9Y2E8 581 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 TMED7Q9Y3B3 224 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 FLVCR1Q9Y5Y0 555 aa12.59□□□□□ -0.39
COL2A1-205ENST00000474996 HMGN4O00479 90 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.4
COL2A1-205ENST00000474996 LY6HO94772 140 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 TACR3P29371 465 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 HTR3AP46098 478 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 POLR2HP52434 150 aaKnown RBP12.58□□□□□ -0.4
COL2A1-205ENST00000474996 ABCE1P61221 599 aaKnown RBP12.58□□□□□ -0.4
COL2A1-205ENST00000474996 CHI3L2Q15782 390 aa12.58□□□□□ -0.4
COL2A1-205ENST00000474996 SYPL1Q16563 259 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms