RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ADRM1Q16186 407 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 INTS11Q5TA45 600 aaKnown RBP12.68□□□□□ -0.38
VAMP4-203ENST00000474047 NANOGP8Q6NSW7 305 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 MTDHQ86UE4 582 aaKnown RBP12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SLC35B4Q969S0 331 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 DACH2Q96NX9 599 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 NAA11Q9BSU3 229 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-203ENST00000474047 MED18Q9BUE0 208 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 POLDIP3Q9BY77 421 aaKnown RBP12.68□□□□□ -0.38
VAMP4-203ENST00000474047 KAT8Q9H7Z6 458 aaKnown RBP12.68□□□□□ -0.38
VAMP4-203ENST00000474047 NANOGQ9H9S0 305 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 SELENONQ9NZV5 590 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 EMC3Q9P0I2 261 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 TRAPPC4Q9Y296 219 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 MPDZO75970 2070 aa12.68□□□□□ -0.38
VAMP4-203ENST00000474047 ITPR2Q14571 2701 aa12.67□□□□□ -0.38
VAMP4-203ENST00000474047 SMAD9O15198 467 aaKnown RBP12.67□□□□□ -0.38
VAMP4-203ENST00000474047 CYTIPO60759 359 aa12.67□□□□□ -0.38
VAMP4-203ENST00000474047 DHRS4L2Q6PKH6 230 aa12.67□□□□□ -0.38
VAMP4-203ENST00000474047 PTOV1Q86YD1 416 aa12.67□□□□□ -0.38
VAMP4-203ENST00000474047 OR52E4Q8NGH9 312 aa12.67□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF775Q96BV0 537 aaPredicted RBP12.67□□□□□ -0.38
VAMP4-203ENST00000474047 TAPBPLQ9BX59 468 aa12.67□□□□□ -0.38
VAMP4-203ENST00000474047 CHST2Q9Y4C5 530 aa12.67□□□□□ -0.38
VAMP4-203ENST00000474047 ELOA3DA6NLF2 546 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-203ENST00000474047 A6NNC1 897 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 M0QX08 132 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 DNPH1O43598 174 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 EIF1BO60739 113 aaKnown RBP12.66□□□□□ -0.38
VAMP4-203ENST00000474047 IDUAP35475 653 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 UGT2B10P36537 528 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 RGS8P57771 180 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-203ENST00000474047 BNIP2Q12982 314 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 ELOA3BQ3SY89 546 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 NUFIP2Q7Z417 695 aaKnown RBP12.66□□□□□ -0.38
VAMP4-203ENST00000474047 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF100Q8IYN0 542 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 SMYD1Q8NB12 490 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 ELOA3Q8NG57 546 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 OR8J3Q8NGG0 315 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 RP9Q8TA86 221 aaKnown RBP12.66□□□□□ -0.38
VAMP4-203ENST00000474047 PIGXQ8TBF5 258 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 PSD2Q9BQI7 771 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 GPATCH1Q9BRR8 931 aaKnown RBP12.66□□□□□ -0.38
VAMP4-203ENST00000474047 POTEKPQ9BYX7 375 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF226Q9NYT6 803 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 ADGRG4Q8IZF6 3080 aa12.66□□□□□ -0.38
VAMP4-203ENST00000474047 GMNCA6NCL1 334 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 A8MVM7 634 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 TPST1O60507 370 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 CTAG2O75638 210 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 GPIP06744 558 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 FPR1P21462 350 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 PCGF2P35227 344 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 PCYT1AP49585 367 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 KRTAP10-9P60411 292 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 GNGT1P63211 74 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 DAZAP2Q15038 168 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 RABL3Q5HYI8 236 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 ANKRD34AQ69YU3 496 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 GALNT5Q7Z7M9 940 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 RANBP3LQ86VV4 465 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 WFIKKN1Q96NZ8 548 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 TRIM2Q9C040 744 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 CLEC4MQ9H2X3 399 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 EVA1AQ9H8M9 152 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 BCO1Q9HAY6 547 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 TMEM27Q9HBJ8 222 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 ABCA12Q86UK0 2595 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 ZC3H12DA2A288 527 aaKnown RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF724A8MTY0 619 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 GPR171O14626 319 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 AIM2O14862 343 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 MFN2O95140 757 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 OPN1SWP03999 348 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 COX4I1P13073 169 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 KLK2P20151 261 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 LSP1P33241 339 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 GYS2P54840 703 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 DMTNQ08495 405 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 CEACAM7Q14002 265 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 OR7A5Q15622 319 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 VMACQ2NL98 169 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 GLIPR1L2Q4G1C9 344 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 NET1Q7Z628 596 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 DNAJA4Q8WW22 397 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 C3orf49Q96BT1 292 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 RCN3Q96D15 328 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 ZC3HAV1LQ96H79 300 aaKnown RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 ZNF300Q96RE9 604 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 RASSF1Q9NS23 344 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 ADPRHL2Q9NX46 363 aa12.65□□□□□ -0.38
VAMP4-203ENST00000474047 TESQ9UGI8 421 aaKnown RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 NOSIPQ9Y314 301 aaKnown RBP12.65□□□□□ -0.38
VAMP4-203ENST00000474047 AHSA1O95433 338 aa12.64□□□□□ -0.39
VAMP4-203ENST00000474047 IMPDH2P12268 514 aa12.64□□□□□ -0.39
VAMP4-203ENST00000474047 GTF2E2P29084 291 aaKnown RBP12.64□□□□□ -0.39
VAMP4-203ENST00000474047 ALG10BQ5I7T1 473 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms