RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 Q8NFD4 153 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 NUDT10Q8NFP7 164 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 OR1J4Q8NGS1 313 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 UBA3Q8TBC4 463 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 C16orf78Q8WTQ4 265 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 C5orf34Q96MH7 638 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 KCNC2Q96PR1 638 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 OR14A2Q96R54 314 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 GAL3ST4Q96RP7 486 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ATG101Q9BSB4 218 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 C20orf85Q9H1P6 137 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXO44Q9H4M3 255 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FZD3Q9NPG1 666 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 MAN2C1Q9NTJ4 1040 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 RNF146Q9NTX7 359 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 UQCC1Q9NVA1 299 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 C2orf42Q9NWW7 574 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXO7Q9Y3I1 522 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3DA0A087WVF3 549 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3IA0A087WXS9 549 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3EA0A087X179 549 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 A0A0G2JNJ9 132 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 IFITM10A6NMD0 228 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM171A2A8MVW0 826 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3LB9A6J9 549 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 H7C417 338 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MDM4O15151 490 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 LANCL1O43813 399 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CREBL2O60519 120 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CYTIPO60759 359 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 PAPLNO95428 1278 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 KNG1P01042 644 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 IGF2P01344 180 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SEMG1P04279 462 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 IL5P05113 134 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 HLA-DOAP06340 250 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SNRPCP09234 159 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SNHG28P0DPA3 235 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 INSRRP14616 1297 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CTSSP25774 331 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 AGTR1P30556 359 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MAS1LP35410 378 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SREBF1P36956 1147 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TM4SF4P48230 202 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 IDH3GP51553 393 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 PNLIPRP2P54317 469 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SP3Q02447 781 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 PLA2G7Q13093 441 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MADCAM1Q13477 382 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC10A1Q14973 349 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SMAD1Q15797 465 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 DUOXA1Q1HG43 343 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ISXQ2M1V0 245 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC36A2Q495M3 483 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SCGB2B2Q4G0G5 96 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3CQ6IPX1 549 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ULK3Q6PHR2 472 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CD200R1LQ6Q8B3 271 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF813Q6ZN06 617 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 LANCL3Q6ZV70 420 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OR2W3Q7Z3T1 314 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3Q8IZP1 549 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 GPD1LQ8N335 351 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OR56B1Q8NGI3 324 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OR10D4PQ8NGN7 298 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OR1S2Q8NGQ3 325 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TERB2Q8NHR7 220 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 PROKR1Q8TCW9 393 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CORO2AQ92828 525 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 NSUN4Q96CB9 384 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FCRL5Q96RD9 977 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 EGFL8Q99944 293 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ADAM2Q99965 735 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MYOCQ99972 504 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CPPED1Q9BRF8 314 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 WRAP53Q9BUR4 548 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MFFQ9GZY8 342 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 UBQLN3Q9H347 655 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 WDCPQ9H6R7 721 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SEC61A2Q9H9S3 476 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MID1IP1Q9NPA3 183 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 KRCC1Q9NPI7 259 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SERHLQ9NQF3 203 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 HEBP1Q9NRV9 189 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 Q9UFV3 132 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OPN4Q9UHM6 478 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXL4Q9UKA2 621 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 NEUROG3Q9Y4Z2 214 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MTCH2Q9Y6C9 303 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FXYD6-FXYD2A0A087WZ82 144 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TRDV1A0A1B0GX56 115 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TCRBV21S2A2A0A5A6 115 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OR2W5A6NFC9 320 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 NAP1L6A6NFF2 107 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 EEF1E1O43324 174 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ZFPL1O95159 310 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CNOT4O95628 575 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ADAP00813 363 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 PPBPP02775 128 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms