RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 H7BYZ3 331 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 KLRC4O43908 158 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 DOK2O60496 412 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 DPP4P27487 766 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 IDUAP35475 653 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 RPS5P46782 204 aaKnown RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 EMP2P54851 167 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 GLO1Q04760 184 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 RAB6CQ53S08 254 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 LCTLQ6UWM7 567 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 GAREM2Q75VX8 874 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 GRAMD2AQ8IUY3 354 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 C1orf87Q8N0U7 546 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 BPIFB2Q8N4F0 458 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SLC15A4Q8N697 577 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 OR8J3Q8NGG0 315 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ST8SIA2Q92186 375 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 NIPSNAP3BQ9BS92 247 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 FBXL2Q9UKC9 423 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 PMS2P1A4D2B8 440 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 KDM4EB2RXH2 506 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-210ENST00000471181 RFXAPO00287 272 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 NCR1O76036 304 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 DFFBO76075 338 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 NDUFB2O95178 105 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 CNR2P34972 360 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 EIF2DP41214 584 aaKnown RBP6.46□□□□□ -1.37
BRCA1-210ENST00000471181 PSMB2P49721 201 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TAS2R19P59542 299 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 HHEXQ03014 270 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 MPEG1Q2M385 716 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 IER5LQ5T953 404 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 KCTD11Q693B1 232 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 CLEC20AQ6ZU45 233 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 NDUFAF7Q7L592 441 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 PIGWQ7Z7B1 504 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 ADAMTS18Q8TE60 1221 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF775Q96BV0 537 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-210ENST00000471181 MVB12BQ9H7P6 319 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 LRIT1Q9P2V4 623 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 FAM198AQ9UFP1 575 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 INSL6Q9Y581 213 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TRBV11-1A0A0K0K1C0 115 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PQU0 124 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TCRBV5S4A2TA0A5A2 114 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 PHOX2AO14813 284 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 ADAM23O75077 832 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 OR7C1O76099 320 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-210ENST00000471181 RNF224P0DH78 156 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 GM2AP17900 193 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 HRH2P25021 359 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 HNRNPA3P51991 378 aaKnown RBP6.46□□□□□ -1.37
BRCA1-210ENST00000471181 AGFG1P52594 562 aaKnown RBP6.46□□□□□ -1.37
BRCA1-210ENST00000471181 SIRPAP78324 504 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 LTBQ06643 244 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 ACKR1Q16570 336 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 SOWAHAQ2M3V2 549 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 SPATS1Q496A3 300 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 APOOLQ6UXV4 268 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 CPOQ8IVL8 374 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 APH1BQ8WW43 257 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TFAP2CQ92754 450 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 CORO2AQ92828 525 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 KIAA1191Q96A73 305 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 CHFRQ96EP1 664 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM19Q96HH6 336 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 DCLRE1CQ96SD1 692 aaKnown RBP6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM43Q9BTV4 400 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 ZCCHC4Q9H5U6 513 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 LIN7BQ9HAP6 207 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM181Q9P2C4 612 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 ADAM29Q9UKF5 820 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 PTGDR2Q9Y5Y4 395 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 CSNK1G3Q9Y6M4 447 aa6.46□□□□□ -1.37
BRCA1-210ENST00000471181 HELTA6NFD8 242 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 IGLON5A6NGN9 336 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 METTL15A6NJ78 407 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 BMPR1BO00238 502 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PIRO00625 290 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PHF1O43189 567 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 MITFO75030 526 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PTTG1O95997 202 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 UBL4AP11441 157 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 CDK4P11802 303 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 BMPR1AP36894 532 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 KIAA0141Q14154 515 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 NR0B2Q15466 257 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 DACT2Q5SW24 774 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 SLC16A14Q7RTX9 510 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 L3MBTL4Q8NA19 623 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 DUSP19Q8WTR2 217 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 CDS1Q92903 461 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 BIRC8Q96P09 236 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF317Q96PQ6 595 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 KCNJ15Q99712 375 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 RTP3Q9BQQ7 232 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ADAMTS10Q9H324 1103 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 INIPQ9NRY2 104 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms