RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SMPDL3BQ92485 455 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 AHCYL2Q96HN2 611 aaKnown RBP7.35□□□□□ -1.23
TPM3-215ENST00000469717 ZNF559Q9BR84 538 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 CRB3Q9BUF7 120 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 IFT27Q9BW83 186 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 TMEM231Q9H6L2 316 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 MED9Q9NWA0 146 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 MARCH5Q9NX47 278 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 SNRNP200O75643 2136 aaKnown RBP7.35□□□□□ -1.23
TPM3-215ENST00000469717 TET1Q8NFU7 2136 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.35□□□□□ -1.23
TPM3-215ENST00000469717 DISC1C4P0D8 188 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 IMPA2O14732 288 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 KIAA0355O15063 1070 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 EIF3GO75821 320 aaKnown RBP eCLIP7.35□□□□□ -1.23
TPM3-215ENST00000469717 OR2A4O95047 310 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 ATP1B1P05026 303 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 RAG2P55895 527 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 ZNF528Q3MIS6 628 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 ZNF626Q68DY1 528 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 FAM199XQ6PEV8 388 aaPredicted RBP7.35□□□□□ -1.23
TPM3-215ENST00000469717 NXPE4Q6UWF7 544 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 MUC20Q8N307 709 aaPredicted RBP7.35□□□□□ -1.23
TPM3-215ENST00000469717 DNAAF1Q8NEP3 725 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 OR2T33Q8NG76 320 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 PIGXQ8TBF5 258 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 LCORQ96JN0 433 aaPredicted RBP7.35□□□□□ -1.23
TPM3-215ENST00000469717 OR2A7Q96R45 310 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 TSNAXQ99598 290 aaKnown RBP7.35□□□□□ -1.23
TPM3-215ENST00000469717 ACTR6Q9GZN1 396 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 MFFQ9GZY8 342 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 ICKQ9UPZ9 632 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 CAMK2AQ9UQM7 478 aa7.35□□□□□ -1.23
TPM3-215ENST00000469717 MTCL1Q9Y4B5 1905 aaKnown RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 SULT1C2O00338 296 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 FOXE1O00358 373 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 NRG2O14511 850 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 FLRT2O43155 660 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 PLPP2O43688 288 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 SOCS5O75159 536 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 SC5DO75845 299 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 ACAA1P09110 424 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 ACADLP28330 430 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 MPIP34949 423 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 NAA10P41227 235 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 EPHA4P54764 986 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 PCBP4P57723 403 aaKnown RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 DYRK1AQ13627 763 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 SMAD2Q15796 467 aaKnown RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 MANEAQ5SRI9 462 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 PSRC1Q6PGN9 363 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 C11orf88Q6PI97 169 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 WDR88Q6ZMY6 472 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 IKBIPQ70UQ0 350 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 NDUFAF7Q7L592 441 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 MCATQ8IVS2 390 aaKnown RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 CMTM8Q8IZV2 173 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 FAM98AQ8NCA5 519 aaKnown RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 PLD4Q96BZ4 506 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 ELP4Q96EB1 424 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 NDC1Q9BTX1 674 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 BCL2L14Q9BZR8 327 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 OR52D1Q9H346 318 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 C6orf106Q9H6K1 298 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 IL21RQ9HBE5 538 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 TMEM138Q9NPI0 162 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 FBXL21Q9UKT6 434 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 CABIN1Q9Y6J0 2220 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 SCAMP1O15126 338 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 CDC123O75794 336 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 GAAP10253 952 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 PRG2P13727 222 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 PPP2R1BP30154 601 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 LUMP51884 338 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 PNLIPRP1P54315 467 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 SHC2P98077 582 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 KCNAB1Q14722 419 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 UBXN2BQ14CS0 331 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 HAGHLQ6PII5 290 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 ZNF783Q6ZMS7 281 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 BEND4Q6ZU67 534 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 RD3Q7Z3Z2 195 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 BARX1Q9HBU1 254 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 SLC7A7Q9UM01 511 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 PCYT1BQ9Y5K3 369 aaPredicted RBP7.34□□□□□ -1.23
TPM3-215ENST00000469717 SCN10AQ9Y5Y9 1956 aa7.34□□□□□ -1.23
TPM3-215ENST00000469717 TRAV27A0A087WT01 109 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 C17orf113A0A1B0GUU1 675 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 SLC5A10A0PJK1 596 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 K7ESM1 405 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 SGCEO43556 437 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 OR2T1O43869 369 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 ADAM11O75078 769 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 RASGRP1O95267 797 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 MT-ND5P03915 603 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 LIPCP11150 499 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 MAKP20794 623 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 NFYBP25208 207 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 GRPRP30550 384 aa7.34□□□□□ -1.24
TPM3-215ENST00000469717 BSGP35613 385 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms