RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 MEPCEQ7L2J0 689 aaKnown RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 CXXC5Q7LFL8 322 aaKnown RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 CEACAM19Q7Z692 300 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 CPOQ8IVL8 374 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 CFAP206Q8IYR0 622 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 NRSN1Q8IZ57 195 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 OR51G2Q8NGK0 314 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 OR5D16Q8NGK9 328 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 OR2A12Q8NGT7 310 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 SMIM4Q8WVI0 70 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 ST8SIA4Q92187 359 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 EXOSC8Q96B26 276 aaKnown RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 RGMAQ96B86 450 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 MOAP1Q96BY2 351 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 SGTBQ96EQ0 304 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 MS4A3Q96HJ5 214 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 AMDHD1Q96NU7 426 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 SPRTNQ9H040 489 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 DPEP2Q9H4A9 486 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 GLIPR2Q9H4G4 154 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 LDAHQ9H6V9 325 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 PLEKHA1Q9HB21 404 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 HINT3Q9NQE9 182 aaKnown RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 ZCCHC3Q9NUD5 404 aaKnown RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 AKAP7Q9P0M2 348 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 A0A1B0GUH1 482 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 A8MUA0 341 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 SOCS6O14544 535 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RNGTTO60942 597 aaKnown RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 TMEM127O75204 238 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 STX11O75558 287 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 B3GALNT1O75752 331 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 CH25HO95992 272 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 HPXP02790 462 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 CPN1P15169 458 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 TIMP2P16035 220 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RAB3BP20337 219 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ACADLP28330 430 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RECQLP46063 649 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 SELENOPP49908 381 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR10A3P58181 314 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 TSPAN5P62079 268 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 DGCR2P98153 550 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 FUT5Q11128 374 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RTP5Q14D33 572 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 MAPK14Q16539 360 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 TCTE1Q5JU00 501 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 AGBL4Q5VU57 503 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 B3GNTL1Q67FW5 361 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 NIPAL3Q6P499 406 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR6V1Q8N148 313 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 EIF4E3Q8N5X7 224 aaKnown RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 EID2Q8N6I1 236 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 BBS1Q8NFJ9 593 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR6M1Q8NGM8 313 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR14C36Q8NHC7 312 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 BRIX1Q8TDN6 353 aaKnown RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR8D1Q8WZ84 308 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 PTP4A1Q93096 173 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 LINC00615Q96LM1 132 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 LINC00052Q96N35 136 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 SFXN2Q96NB2 322 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 FCRL4Q96PJ5 515 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 F2RL3Q96RI0 385 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 AIF1LQ9BQI0 150 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 NDC1Q9BTX1 674 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 NRSN2Q9GZP1 204 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 C20orf85Q9H1P6 137 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 METTL17Q9H7H0 456 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 LHX9Q9NQ69 397 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 WASH6PQ9NQA3 447 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 CALML5Q9NZT1 146 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RPS6KB2Q9UBS0 482 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ING1Q9UK53 422 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 SLC13A4Q9UKG4 626 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 FBXL3Q9UKT7 428 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 A0A1B0GVC2 190 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 DAPL1A0PJW8 107 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 A6NIN4 97 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 C1QTNF3-AMACRE9PGA6 284 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RTCAO00442 366 aaKnown RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 TMPRSS11DO60235 418 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR5F1O95221 314 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ECDO95905 644 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 GIPP09681 153 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ANKRD34CP0C6C1 535 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ICAM2P13598 275 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 PBLDP30039 288 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 PRKAR1BP31321 381 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 CCR9P51686 369 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 TAS2R38P59533 333 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RAP2BP61225 183 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 BTN1A1Q13410 526 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 LIPIQ6XZB0 460 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 Q6ZVU0 165 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 CHMP1BQ7LBR1 199 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 MEX3DQ86XN8 651 aaKnown RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 DTX3Q8N9I9 347 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF527Q8NB42 609 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms