RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 AK1P00568 194 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 VLDLRP98155 873 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 SYPL1Q16563 259 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 MST1LQ2TV78 715 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 GPAT3Q53EU6 434 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 CYB5R2Q6BCY4 276 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 CASP12Q6UXS9 341 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 GRINAQ7Z429 371 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 CNPY4Q8N129 248 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 ZNF781Q8N8C0 355 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 ANKFN1Q8N957 763 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 FBXO17Q96EF6 278 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 SAP130Q9H0E3 1048 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 TMEM181Q9P2C4 612 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 UPB1Q9UBR1 384 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 MALT1Q9UDY8 824 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 PCDHGB4Q9UN71 923 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 TMED7Q9Y3B3 224 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 PRSS51A0A1B0GVH4 220 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 ATP6V1G2-DDX39BF2Z307 99 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 RNASET2O00584 256 aaKnown RBP10.73□□□□□ -0.69
HDAC3-204ENST00000469207 UQCRC2P22695 453 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 TACR3P29371 465 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 MAGEA8P43361 318 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 SLC16A1P53985 500 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 NME5P56597 212 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 DSCR9P59020 149 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 LGALS3BPQ08380 585 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 HIKESHIQ53FT3 197 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 SPANXN4Q5MJ08 99 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 SAXO2Q658L1 398 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 OR7E24Q6IFN5 339 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 DEPDC4Q8N2C3 294 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 ARFGAP2Q8N6H7 521 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 ZIC4Q8N9L1 334 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 OR8J2Q8NGG1 315 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 PIGXQ8TBF5 258 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 MIPOL1Q8TD10 442 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 SLC25A43Q8WUT9 341 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-204ENST00000469207 C3orf49Q96BT1 292 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 ZHX1-C8orf76Q96EF9 292 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 TEX37Q96LM6 180 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 ZNF385AQ96PM9 386 aaKnown RBP10.73□□□□□ -0.69
HDAC3-204ENST00000469207 DPY30Q9C005 99 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 SLC17A5Q9NRA2 495 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 NOP53Q9NZM5 478 aaKnown RBP10.73□□□□□ -0.69
HDAC3-204ENST00000469207 OSGIN1Q9UJX0 560 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 CDC42EP3Q9UKI2 254 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 MOKQ9UQ07 419 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 SLC35A3Q9Y2D2 325 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 HDGFL3Q9Y3E1 203 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 FLVCR1Q9Y5Y0 555 aa10.73□□□□□ -0.69
HDAC3-204ENST00000469207 MALRD1Q5VYJ5 2156 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 H7C417 338 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 HMGN4O00479 90 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 GPR171O14626 319 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 ANKRD28O15084 1053 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 LMX1BO60663 402 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 AKR7A3O95154 331 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 F12P00748 615 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 SLC25A16P16260 332 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 USF1P22415 310 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 IGFBP5P24593 272 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 APOBEC3AP31941 199 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 ETV4P43268 484 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 EFNA4P52798 201 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 GGTLC2Q14390 218 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 SLC17A1Q14916 467 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 SWI5Q1ZZU3 235 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 ATAD3BQ5T9A4 648 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 AP1ARQ63HQ0 302 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 ZNF544Q6NX49 715 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 NUDCD3Q8IVD9 361 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 TMEM99Q8N816 258 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 ANKS4BQ8N8V4 417 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 EIF1ADQ8N9N8 165 aaKnown RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 AURKBQ96GD4 344 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 FOXN4Q96NZ1 517 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 SORCS2Q96PQ0 1159 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 PRR14Q9BWN1 585 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 AMBRA1Q9C0C7 1298 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 CHODLQ9H9P2 273 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 ASIC5Q9NY37 505 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 MARCOQ9UEW3 520 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 TRAPPC4Q9Y296 219 aa10.72□□□□□ -0.69
HDAC3-204ENST00000469207 SPIN1Q9Y657 262 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-204ENST00000469207 NR5A2O00482 541 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 TYROBPO43914 113 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 GSNP06396 782 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 CHRM4P08173 479 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 GKN3PP0CG01 181 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 CHI3L1P36222 383 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-204ENST00000469207 SERPINB5P36952 375 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 CDKN2CP42773 168 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 TUBA1BP68363 451 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 TUBA4AP68366 448 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 SLC35A1P78382 337 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 BNIP2Q12982 314 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms