RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ADGRG3Q86Y34 549 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 C4orf33Q8N1A6 199 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 ZNF563Q8TA94 476 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 FBXO17Q96EF6 278 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 SLC35G5Q96KT7 338 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 PRPF18Q99633 342 aaKnown RBP11.43□□□□□ -0.58
PTPN7-207ENST00000468385 SLC7A10Q9NS82 523 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 UPB1Q9UBR1 384 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 MOKQ9UQ07 419 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 SLC35A3Q9Y2D2 325 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 FLVCR1Q9Y5Y0 555 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 FKBP7Q9Y680 259 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 ARFGEF3Q5TH69 2177 aa11.43□□□□□ -0.58
PTPN7-207ENST00000468385 RNF103-CHMP3A0A140T963 221 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 KIAA0513O60268 411 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 SLU7O95391 586 aaKnown RBP11.42□□□□□ -0.58
PTPN7-207ENST00000468385 GUSBP08236 651 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 PRPS1L1P21108 318 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 FKBP2P26885 142 aaKnown RBP11.42□□□□□ -0.58
PTPN7-207ENST00000468385 ALDH3A1P30838 453 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 RYKP34925 604 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 CLK1P49759 484 aaKnown RBP11.42□□□□□ -0.58
PTPN7-207ENST00000468385 OR2B6P58173 313 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 ATP6AP1LQ52LC2 224 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 AP1ARQ63HQ0 302 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 EMBQ6PCB8 327 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 GSPT2Q8IYD1 628 aaKnown RBP11.42□□□□□ -0.58
PTPN7-207ENST00000468385 CLECL1Q8IZS7 167 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 FNDC5Q8NAU1 212 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 AGR3Q8TD06 166 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 OIT3Q8WWZ8 545 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 C3orf49Q96BT1 292 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 SOX7Q9BT81 388 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 OR51I1Q9H343 314 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 TMEM181Q9P2C4 612 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 TRAPPC4Q9Y296 219 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 SLC9A8Q9Y2E8 581 aa11.42□□□□□ -0.58
PTPN7-207ENST00000468385 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 SMIM23A6NLE4 172 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 PGRP06401 933 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 OR12D1P0DN82 309 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 G6PDP11413 515 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 IMPDH2P12268 514 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 CCNA2P20248 432 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 HNF1AP20823 631 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 MPGP29372 298 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 ARRB2P32121 409 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 PRPS1P60891 318 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 FUT5Q11128 374 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 SQLEQ14534 574 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 SLC17A1Q14916 467 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 C1QTNF12Q5T7M4 302 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 FRRS1Q6ZNA5 592 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 C16orf62Q7Z3J2 963 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 HMGN2P46Q86SG4 172 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 ANKS4BQ8N8V4 417 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 MIPOL1Q8TD10 442 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 ZG16BQ96DA0 208 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 FOXN4Q96NZ1 517 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 MECRQ9BV79 373 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 SAP130Q9H0E3 1048 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 EXOSC3Q9NQT5 275 aaKnown RBP11.41□□□□□ -0.58
PTPN7-207ENST00000468385 EXD2Q9NVH0 621 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 WDR45Q9Y484 360 aa11.41□□□□□ -0.58
PTPN7-207ENST00000468385 HEATR1Q9H583 2144 aaKnown RBP11.41□□□□□ -0.58
PTPN7-207ENST00000468385 IGHV1-18A0A0C4DH31 117 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 TMEM72A0PK05 275 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 CLDN24A6NM45 220 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 EIF1BO60739 113 aaKnown RBP11.4□□□□□ -0.58
PTPN7-207ENST00000468385 SKAP2O75563 359 aaPredicted RBP11.4□□□□□ -0.58
PTPN7-207ENST00000468385 WNT11O96014 354 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 TGFAP01135 160 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 ZNF23P17027 643 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 IDH2P48735 452 aaKnown RBP11.4□□□□□ -0.58
PTPN7-207ENST00000468385 CLDN8P56748 225 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 SNRPD2P62316 118 aaKnown RBP11.4□□□□□ -0.58
PTPN7-207ENST00000468385 SLC35A1P78382 337 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 KCNJ10P78508 379 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 TGFBR3Q03167 851 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 CARTPTQ16568 116 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 CR1LQ2VPA4 569 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 PGS1Q32NB8 556 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 LIPNQ5VXI9 398 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 OR4F3Q6IEY1 312 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 ZCCHC23Q6ZST2 131 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 EPS8L3Q8TE67 593 aaKnown RBP11.4□□□□□ -0.58
PTPN7-207ENST00000468385 XAGE5Q8WWM1 108 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 TMEM45BQ96B21 275 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 BOD1Q96IK1 185 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 NAA11Q9BSU3 229 aaPredicted RBP11.4□□□□□ -0.58
PTPN7-207ENST00000468385 BPESC1Q9GZL8 116 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 MYOZ1Q9NP98 299 aaPredicted RBP11.4□□□□□ -0.58
PTPN7-207ENST00000468385 POLE3Q9NRF9 147 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 MKS1Q9NXB0 559 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 ZDHHC2Q9UIJ5 367 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 PCDHGB4Q9UN71 923 aa11.4□□□□□ -0.58
PTPN7-207ENST00000468385 TMED7-TICAM2A0A0A6YYA0 188 aa11.39□□□□□ -0.59
PTPN7-207ENST00000468385 PRAMEF27A3QJZ7 478 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms