RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ICAM2P13598 275 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 CXCR2P25025 360 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 YWHABP31946 246 aaKnown RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 SHMT2P34897 504 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 ACADVLP49748 655 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 DAP3P51398 398 aaKnown RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 SCGB2A2Q13296 93 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 PSG5Q15238 335 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 TMEM41BQ5BJD5 291 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 OR52W1Q6IF63 320 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 C11orf71Q6IPW1 123 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 KCNIP4Q6PIL6 250 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 TMIGD1Q6UXZ0 262 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 SYT10Q6XYQ8 523 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 ZNF571Q7Z3V5 609 aaPredicted RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 GRAMD2AQ8IUY3 354 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 CENPLQ8N0S6 344 aaPredicted RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 FTMTQ8N4E7 242 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 STXBP6Q8NFX7 210 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 OR10A7Q8NGE5 316 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 NDRG1Q92597 394 aaKnown RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 MRPS31Q92665 395 aaKnown RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 FGF11Q92914 225 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 PELOQ9BRX2 385 aaKnown RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 OR11A1Q9GZK7 315 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 TMEM117Q9H0C3 514 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 DPH5Q9H2P9 285 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 NUDT15Q9NV35 164 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 SMPD3Q9NY59 655 aaPredicted RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 ACTR3BQ9P1U1 418 aa2.44□□□□□ -2.02
SMC4-207ENST00000467263 STOX2Q9P2F5 926 aaPredicted RBP2.44□□□□□ -2.02
SMC4-207ENST00000467263 PHF3Q92576 2039 aaKnown RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 DCTN6O00399 190 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 DLGAP1O14490 977 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 ZSCAN12O43309 604 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 LRATO95237 230 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 AK1P00568 194 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 ADRB3P13945 408 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 CRISP2P16562 243 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 NT5EP21589 574 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 LONP1P36776 959 aaKnown RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 VDAC2P45880 294 aaPredicted RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 RPS9P46781 194 aaKnown RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 KPNA2P52292 529 aaKnown RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 HSD17B7P56937 341 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 EIF4EBP1Q13541 118 aaPredicted RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 GGTA1PQ4G0N0 100 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 TP53I3Q53FA7 332 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 BLOC1S2Q6QNY1 142 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 H1FOOQ8IZA3 346 aaPredicted RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 RDH10Q8IZV5 341 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 ZNF561Q8N587 486 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 DHRSXQ8N5I4 330 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 DUSP18Q8NEJ0 188 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 OR6C4Q8NGE1 309 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 OR4D9Q8NGE8 314 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 OR6X1Q8NH79 312 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 OR9G1Q8NH87 305 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 TIMD4Q96H15 378 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 RIT2Q99578 217 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 P2RY13Q9BPV8 354 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 ZNF670Q9BS34 389 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 ZNF416Q9BWM5 594 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 POLR1EQ9GZS1 481 aaKnown RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 C20orf85Q9H1P6 137 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 NTN4Q9HB63 628 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 EML4Q9HC35 981 aaKnown RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 SLC17A5Q9NRA2 495 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 RBAKQ9NYW8 714 aaPredicted RBP2.43□□□□□ -2.02
SMC4-207ENST00000467263 DEC1Q9P2X7 70 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 TBK1Q9UHD2 729 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 STAP1Q9ULZ2 295 aa2.43□□□□□ -2.02
SMC4-207ENST00000467263 SH3TC1Q8TE82 1336 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 LRP4O75096 1905 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 TRDCB7Z8K6 153 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 LAD1O00515 517 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 MBTPS2O43462 519 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 CXCL13O43927 109 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 TPST2O60704 377 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 MED6O75586 246 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 TRIM16O95361 564 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 STAMBPO95630 424 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 DIRAS3O95661 229 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 LGALS2P05162 132 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 HTR2AP28223 471 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 HOXA9P31269 272 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 PTGDSP41222 190 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 RPS14P62263 151 aaKnown RBP2.42□□□□□ -2.02
SMC4-207ENST00000467263 ACTA1P68133 377 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 CSTF1Q05048 431 aaKnown RBP2.42□□□□□ -2.02
SMC4-207ENST00000467263 C16orf72Q14CZ0 275 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 INAQ16352 499 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 TPGS2Q68CL5 300 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 TIGD3Q6B0B8 471 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 CTRB2Q6GPI1 263 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 FAM71F2Q6NXP2 309 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 PRSS41Q7RTY9 318 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 TMEM61Q8N0U2 210 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 CLDN19Q8N6F1 224 aa2.42□□□□□ -2.02
SMC4-207ENST00000467263 CATSPER1Q8NEC5 780 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms