RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 LILRB4Q8NHJ6 448 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 INTS12Q96CB8 462 aaKnown RBP18.18■□□□□ 0.5
PTCD3-206ENST00000465560 ARL5BQ96KC2 179 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 MCHR1Q99705 422 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 PRRG4Q9BZD6 226 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 PCDHAC1Q9H158 963 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 C1orf21Q9H246 121 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 ADPRHL2Q9NX46 363 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 ZNF629Q9UEG4 869 aaPredicted RBP18.18■□□□□ 0.5
PTCD3-206ENST00000465560 SH3GLB1Q9Y371 365 aa18.18■□□□□ 0.5
PTCD3-206ENST00000465560 A0A0B4J2E0 115 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 A0A1B0GX12 115 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 ZC3H12DA2A288 527 aaKnown RBP18.17■□□□□ 0.5
PTCD3-206ENST00000465560 PMS2P2O95744 297 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 CLDN1O95832 211 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 IL18BPO95998 194 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 NCK1P16333 377 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 CSNK2A1P68400 391 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-206ENST00000465560 ALG10BQ5I7T1 473 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 ZNF613Q6PF04 617 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 ULK3Q6PHR2 472 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 CBLL1Q75N03 491 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 LSRQ86X29 649 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-206ENST00000465560 RBM45Q8IUH3 476 aaKnown RBP18.17■□□□□ 0.5
PTCD3-206ENST00000465560 LIX1LQ8IVB5 337 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 GCNT2Q8N0V5 402 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 LZICQ8WZA0 190 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 FAM162AQ96A26 154 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 TPD52L3Q96J77 140 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 SFXN3Q9BWM7 321 aa18.17■□□□□ 0.5
PTCD3-206ENST00000465560 A1L4Q6 167 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 ELOA3DA6NLF2 546 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-206ENST00000465560 FAM90A27PA6NNH2 459 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 A8MVM7 634 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 SULT2B1O00204 365 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 DVL2O14641 736 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 DNPH1O43598 174 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 SERPINA1P01009 418 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 CRHP06850 196 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 PNMTP11086 282 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 TCN1P20061 433 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-206ENST00000465560 TNFRSF1BP20333 461 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 OPRM1P35372 400 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 FOXF2Q12947 444 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 BNIP2Q12982 314 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 SLC25A35Q3KQZ1 300 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 ELOA3BQ3SY89 546 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 ENTPD8Q5MY95 495 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 SWT1Q5T5J6 900 aaKnown RBP18.16■□□□□ 0.5
PTCD3-206ENST00000465560 GLYATQ6IB77 296 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 ARHGAP24Q8N264 748 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 ELOA3Q8NG57 546 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 RNF128Q8TEB7 428 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 SLC38A4Q969I6 547 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 SLC47A1Q96FL8 570 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 POTEKPQ9BYX7 375 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 SELENONQ9NZV5 590 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 MAGEL2Q9UJ55 1249 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 TRAPPC4Q9Y296 219 aa18.16■□□□□ 0.5
PTCD3-206ENST00000465560 KLF2Q9Y5W3 355 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-206ENST00000465560 UTP20O75691 2785 aaKnown RBP18.16■□□□□ 0.5
PTCD3-206ENST00000465560 CPSF4LA6NMK7 179 aaKnown RBP18.15■□□□□ 0.5
PTCD3-206ENST00000465560 NPIPB7O75200 414 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 GMNNO75496 209 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 BMP5P22003 454 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 CEACAM7Q14002 265 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 GUSBP1Q15486 140 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 EEF1A1P5Q5VTE0 462 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 FCRLAQ7L513 359 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 MAMDC2Q7Z304 686 aaPredicted RBP18.15■□□□□ 0.5
PTCD3-206ENST00000465560 RELL2Q8NC24 303 aaPredicted RBP18.15■□□□□ 0.5
PTCD3-206ENST00000465560 STK35Q8TDR2 534 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 ROBO4Q8WZ75 1007 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 DNAJA3Q96EY1 480 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 GORASP2Q9H8Y8 452 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 TAS2R1Q9NYW7 299 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 RPS6KA6Q9UK32 745 aa18.15■□□□□ 0.5
PTCD3-206ENST00000465560 A0A087WUJ7 227 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 A0A1W2PNV4 684 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 SMAD9O15198 467 aaKnown RBP18.14■□□□□ 0.49
PTCD3-206ENST00000465560 TNFSF13O75888 250 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 ZNF682O95780 498 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 IMPDH2P12268 514 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 ENPP1P22413 925 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 IDUAP35475 653 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 OR1E2P47887 323 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 CDH12P55289 794 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 RNPS1Q15287 305 aaKnown RBP18.14■□□□□ 0.49
PTCD3-206ENST00000465560 GTF2IRD2BQ6EKJ0 949 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 VTCN1Q7Z7D3 282 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 GTF2IRD2Q86UP8 949 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 TSPYL5Q86VY4 417 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-206ENST00000465560 ADAMTS16Q8TE57 1224 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 ZHX1-C8orf76Q96EF9 292 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 GMPPAQ96IJ6 420 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-206ENST00000465560 UCK2Q9BZX2 261 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 POLR2J2Q9GZM3 115 aaKnown RBP18.14■□□□□ 0.49
PTCD3-206ENST00000465560 POLR2J3Q9H1A7 115 aaKnown RBP18.14■□□□□ 0.49
PTCD3-206ENST00000465560 GLRX2Q9NS18 164 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 PRPF19Q9UMS4 504 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms