RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CT45A2Q5DJT8 189 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 FOXB2Q5VYV0 432 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 HLA-DQA1Q5Y7H0 255 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 NPSR1Q6W5P4 371 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 Q6ZPB1 254 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 KCTD8Q6ZWB6 473 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 MBOAT2Q6ZWT7 520 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 LAPTM4BQ86VI4 370 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 SHISA5Q8N114 240 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 CLDN22Q8N7P3 220 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 BPIFB6Q8NFQ5 453 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 ZNF420Q8TAQ5 688 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 CNIH3Q8TBE1 160 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 SLC2A12Q8TD20 617 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 NANOS1Q8WY41 292 aaKnown RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 MYDGFQ969H8 173 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 HS6ST2Q96MM7 605 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 SMR3AQ99954 134 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 WFDC6Q9BQY6 131 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 VN1R1Q9GZP7 353 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 RBM38Q9H0Z9 239 aaKnown RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 LIME1Q9H400 295 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 DUSP21Q9H596 190 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 TMEM27Q9HBJ8 222 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 REV1Q9UBZ9 1251 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 NXT1Q9UKK6 140 aaKnown RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 MKL2Q9ULH7 1088 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 RNF6Q9Y252 685 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 TMEM5Q9Y2B1 443 aa12.59□□□□□ -0.39
HDAC6-215ENST00000465457 RPH3AQ9Y2J0 694 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-215ENST00000465457 A0A087WUU8 490 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 NSG1A0A0A6YYJ2 146 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 HTR3EA5X5Y0 456 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 H3BN98 237 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 RGS10O43665 173 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 EPHA2P29317 976 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 ADH7P40394 386 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 RBM34P42696 430 aaKnown RBP12.58□□□□□ -0.4
HDAC6-215ENST00000465457 GSSP48637 474 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 EFNA3P52797 238 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 SNRPGP62308 76 aaKnown RBP12.58□□□□□ -0.4
HDAC6-215ENST00000465457 SLC35A2P78381 396 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 MAPK14Q16539 360 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 PDZK1Q5T2W1 519 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 C12orf73Q69YU5 71 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 LAIR2Q6ISS4 152 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 RPL13AP3Q6NVV1 102 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 CASP12Q6UXS9 341 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 RASSF6Q6ZTQ3 369 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 SLC29A4Q7RTT9 530 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 ZER1Q7Z7L7 766 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 HMGN2P46Q86SG4 172 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 CCDC71Q8IV32 467 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-215ENST00000465457 TEX47Q8TBZ9 253 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 STT3BQ8TCJ2 826 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 DOK4Q8TEW6 326 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 FCGR1BQ92637 280 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 TSLPQ969D9 159 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 MPP4Q96JB8 637 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 LCORQ96JN0 433 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-215ENST00000465457 GPR137Q96N19 417 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 OR8D2Q9GZM6 311 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 CXorf56Q9H5V9 222 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 SLC25A19Q9HC21 320 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 CLN6Q9NWW5 311 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 KCNE5Q9UJ90 142 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 COMMD3-BMI1R4GMX3 469 aa12.58□□□□□ -0.4
HDAC6-215ENST00000465457 DNAJC13O75165 2243 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 FAM221AA4D161 298 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 NKX2-6A6NCS4 301 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 OR5H15A6NDH6 313 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 NPIPA5E9PKD4 350 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 HRKO00198 91 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 TO15178 435 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 FRS3O43559 492 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 TPST2O60704 377 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 NOL3O60936 208 aaKnown RBP12.57□□□□□ -0.4
HDAC6-215ENST00000465457 WBP4O75554 376 aaKnown RBP12.57□□□□□ -0.4
HDAC6-215ENST00000465457 IL33O95760 270 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 SERPINA7P05543 415 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 ZGLP1P0C6A0 271 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 OR1Q1Q15612 314 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 TMEM44Q2T9K0 475 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 MEDAGQ5VYS4 303 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 PRSS48Q7RTY5 328 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 FGD2Q7Z6J4 655 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 CDK20Q8IZL9 346 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 SPARTQ8N0X7 666 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 SLC43A2Q8N370 569 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 LSMEM1Q8N8F7 131 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF540Q8NDQ6 660 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 OR8J1Q8NGP2 316 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF721Q8TF20 911 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 CA5BP1Q8WTZ4 195 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 METTL21AQ8WXB1 218 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 OSTF1Q92882 214 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 HSPBAP1Q96EW2 488 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 DMRTA2Q96SC8 542 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 REPIN1Q9BWE0 567 aaKnown RBP12.57□□□□□ -0.4
HDAC6-215ENST00000465457 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms