RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 C9orf106Q8NAJ2 232 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 FNDC9Q8TBE3 224 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 RSPO3Q9BXY4 272 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-204ENST00000463487 POTEKPQ9BYX7 375 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 PCDHAC1Q9H158 963 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 GORASP2Q9H8Y8 452 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 GMPR2Q9P2T1 348 aaKnown RBP17.76■□□□□ 0.43
COL9A3-204ENST00000463487 ZNF629Q9UEG4 869 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-204ENST00000463487 RNF6Q9Y252 685 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 RELNP78509 3460 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 A0A0G2JNJ9 132 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 A0A1W2PNR3 127 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 TMEM72A0PK05 275 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 TRAPPC13A5PLN9 417 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 CLDN14O95500 239 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 ENPP1P22413 925 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 CTSSP25774 331 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 OPRM1P35372 400 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 IDUAP35475 653 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 MYBPHQ13203 477 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 RNPS1Q15287 305 aaKnown RBP17.75■□□□□ 0.43
COL9A3-204ENST00000463487 IFI44LQ53G44 452 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 ENTPD8Q5MY95 495 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 SEM1Q6ZVN7 128 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 FAM156AQ8NDB6 213 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 STK35Q8TDR2 534 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 LRRC46Q96FV0 321 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 NSMCE2Q96MF7 247 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 SFXN3Q9BWM7 321 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 TAPBPLQ9BX59 468 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 COQ10BQ9H8M1 238 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 RNF122Q9H9V4 155 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 TAS2R1Q9NYW7 299 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 Q9UFV3 132 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 PACSIN3Q9UKS6 424 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 TRAPPC4Q9Y296 219 aa17.75■□□□□ 0.43
COL9A3-204ENST00000463487 A0A0B4J2E0 115 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 A0A1B0GX12 115 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 CPSF4LA6NMK7 179 aaKnown RBP17.74■□□□□ 0.43
COL9A3-204ENST00000463487 CHP2O43745 196 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 EIF1BO60739 113 aaKnown RBP17.74■□□□□ 0.43
COL9A3-204ENST00000463487 AHSA1O95433 338 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 TGM6O95932 706 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 IFNW1P05000 195 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 GPIP06744 558 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 TAS2R41P59536 307 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 SLC35A1P78382 337 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 FXNQ16595 210 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 SLC25A35Q3KQZ1 300 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 DEF8Q6ZN54 512 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 ADAMTS16Q8TE57 1224 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 POP5Q969H6 163 aaKnown RBP17.74■□□□□ 0.43
COL9A3-204ENST00000463487 SLC38A4Q969I6 547 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 EPYCQ99645 322 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 TACO1Q9BSH4 297 aaKnown RBP17.74■□□□□ 0.43
COL9A3-204ENST00000463487 OR11A1Q9GZK7 315 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 EMC9Q9Y3B6 208 aa17.74■□□□□ 0.43
COL9A3-204ENST00000463487 TMEM229AB2RXF0 380 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 ARPC2O15144 300 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 TOXO94900 526 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 IL18BPO95998 194 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 GTF2E2P29084 291 aaKnown RBP17.73■□□□□ 0.43
COL9A3-204ENST00000463487 OR1E2P47887 323 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 CTBP2P56545 445 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 OR2B6P58173 313 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 CEACAM7Q14002 265 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 FCRLAQ7L513 359 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 CYP4Z1Q86W10 505 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 CCDC71Q8IV32 467 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-204ENST00000463487 LILRB4Q8NHJ6 448 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 INTS12Q96CB8 462 aaKnown RBP17.73■□□□□ 0.43
COL9A3-204ENST00000463487 GMPPAQ96IJ6 420 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-204ENST00000463487 MPP4Q96JB8 637 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 HSH2DQ96JZ2 352 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 ARL5BQ96KC2 179 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 BTBD10Q9BSF8 475 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 NAA11Q9BSU3 229 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-204ENST00000463487 THTPAQ9BU02 230 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 SRXN1Q9BYN0 137 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 GP6Q9HCN6 339 aa17.73■□□□□ 0.43
COL9A3-204ENST00000463487 DCAF13Q9NV06 445 aaKnown RBP17.73■□□□□ 0.43
COL9A3-204ENST00000463487 NCOA6Q14686 2063 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-204ENST00000463487 A0A087WUJ7 227 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 KDM4EB2RXH2 506 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-204ENST00000463487 OR2T1O43869 369 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 THRBP10828 461 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 BMP5P22003 454 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 CDH12P55289 794 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 BNIP1Q12981 228 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 NPTX1Q15818 432 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 MTX3Q5HYI7 312 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 C1orf140Q5VVS0 124 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 VTCN1Q7Z7D3 282 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 RBM45Q8IUH3 476 aaKnown RBP17.72■□□□□ 0.43
COL9A3-204ENST00000463487 GCNT2Q8N0V5 402 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 OR4D11Q8NGI4 311 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 RNF128Q8TEB7 428 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 TRIM15Q9C019 465 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 PIGMQ9H3S5 423 aa17.72■□□□□ 0.43
COL9A3-204ENST00000463487 KCNJ16Q9NPI9 418 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms