RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 TBX1O43435 398 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 HIST1H1CP16403 213 aaKnown RBP18.49■□□□□ 0.55
CCM2-203ENST00000461377 MST1P26927 711 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 IL12BP29460 328 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 TNFSF8P32971 234 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 SDC2P34741 201 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 NR0B1P51843 470 aaKnown RBP18.49■□□□□ 0.55
CCM2-203ENST00000461377 SLC16A1P53985 500 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 ACY1Q03154 408 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 MXD1Q05195 221 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 RUNX1T1Q06455 604 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 ZNF441Q8N8Z8 693 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 SYT14Q8NB59 555 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 OR10H4Q8NGA5 316 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 CEP19Q96LK0 163 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 TBX5Q99593 518 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 FSCN3Q9NQT6 498 aa18.49■□□□□ 0.55
CCM2-203ENST00000461377 FUOMA2VDF0 154 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 LOC110117498-PIK3R3F6TDL0 507 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 SIGLEC6O43699 453 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 HLA-DPB1P04440 258 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 TGM4P49221 684 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 CCL7P80098 99 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 POU4F2Q12837 409 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 HNRNPA0Q13151 305 aaKnown RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 GPR50Q13585 617 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 LANCL3Q6ZV70 420 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 SLC29A4Q7RTT9 530 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 SDR9C7Q8NEX9 313 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 OR4K13Q8NH42 304 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 LIPHQ8WWY8 451 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 WDFY2Q96P53 400 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 GPX7Q96SL4 187 aaPredicted RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 SLC30A2Q9BRI3 323 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 TMED9Q9BVK6 235 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 RTN4RQ9BZR6 473 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 TPK1Q9H3S4 243 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 PLEKHB1Q9UF11 243 aaPredicted RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 PCDHGB6Q9Y5F9 930 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 ARID1BQ8NFD5 2236 aaPredicted RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 IGLV3-12A0A075B6K2 115 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 A0A1W2PQD3 144 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 CDC14CA4D256 554 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 PDGFBP01127 241 aaPredicted RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 MRPL3P09001 348 aaKnown RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 PSPHP78330 225 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 ISXQ2M1V0 245 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 HLA-BQ31612 363 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 FAM98AQ8NCA5 519 aaKnown RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 FAM83FQ8NEG4 500 aaPredicted RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 SMPDL3BQ92485 455 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 ZNF524Q96C55 264 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 RNF31Q96EP0 1072 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 DCLRE1CQ96SD1 692 aaKnown RBP18.48■□□□□ 0.55
CCM2-203ENST00000461377 NRIP3Q9NQ35 241 aa18.48■□□□□ 0.55
CCM2-203ENST00000461377 TNRC6BQ9UPQ9 1833 aaKnown RBP18.47■□□□□ 0.55
CCM2-203ENST00000461377 SLC35F4A4IF30 521 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 GABRPO00591 440 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 ARPC3O15145 178 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 SNX4O95219 450 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 GYPBP06028 91 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 GALP22466 123 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 RPL4P36578 427 aaKnown RBP18.47■□□□□ 0.55
CCM2-203ENST00000461377 SLC6A8P48029 635 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 BCAP31P51572 246 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 PRPS1P60891 318 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 ZNF117Q03924 483 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 PLCXD2Q0VAA5 305 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 STEAP3Q658P3 488 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 FAM181AQ8N9Y4 354 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 OR4D9Q8NGE8 314 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 STT3BQ8TCJ2 826 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 SNRNP27Q8WVK2 155 aaKnown RBP18.47■□□□□ 0.55
CCM2-203ENST00000461377 ASB15Q8WXK1 588 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 OMA1Q96E52 524 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 KLHDC3Q9BQ90 382 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 KATNB1Q9BVA0 655 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 SLC7A5P2Q9GIP4 190 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 C12orf10Q9HB07 376 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 ADAM18Q9Y3Q7 739 aa18.47■□□□□ 0.55
CCM2-203ENST00000461377 UNC13CQ8NB66 2214 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 ALG1L2C9J202 215 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 ZNF85Q03923 595 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 DNASE1L3Q13609 305 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 ZNF74Q16587 644 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 GXYLT1Q4G148 440 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 ZNF554Q86TJ5 538 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 SLC22A16Q86VW1 577 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 DEFB123Q8N688 67 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 C17orf47Q8NEP4 570 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 DDOQ99489 341 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 ADAM19Q9H013 955 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 POLHQ9Y253 713 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 SIRT4Q9Y6E7 314 aaPredicted RBP18.46■□□□□ 0.55
CCM2-203ENST00000461377 HEATR5AQ86XA9 2040 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 RGS5O15539 181 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 RNF13O43567 381 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 MT-ND5P03915 603 aa18.46■□□□□ 0.55
CCM2-203ENST00000461377 GTF2E2P29084 291 aaKnown RBP18.46■□□□□ 0.55
CCM2-203ENST00000461377 RGS19P49795 217 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms