RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 HCRTR1O43613 425 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 AKAP8O43823 692 aaKnown RBP14.25□□□□□ -0.13
LMNB1-203ENST00000460265 HCN1O60741 890 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 DBIP07108 87 aaKnown RBP14.25□□□□□ -0.13
LMNB1-203ENST00000460265 MAOAP21397 527 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 STOMP27105 288 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 LIMS1P48059 325 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 BTG2P78543 158 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 MRPS21P82921 87 aaKnown RBP14.25□□□□□ -0.13
LMNB1-203ENST00000460265 TTLL10Q6ZVT0 673 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF619Q8N2I2 560 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF681Q96N22 645 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 LRRN3Q9H3W5 708 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 LMAN1LQ9HAT1 526 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 FOLH1BQ9HBA9 442 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 SDHAF2Q9NX18 166 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 CES1P1Q9UKY3 287 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 VCANP13611 3396 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 AHCTF1Q8WYP5 2266 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 IQCMA0A1B0GVH7 501 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 RPS10-NUDT3A0A1W2PQS6 291 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 RHPN2P1A8MT19 583 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 C2CD4DB7Z1M9 353 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF670-ZNF695F2Z2N8 137 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 M0R233 179 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 CDC42EP2O14613 210 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 MAGEB4O15481 346 aaPredicted RBP14.24□□□□□ -0.13
LMNB1-203ENST00000460265 TBX19O60806 448 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 PYCR1P32322 319 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 CSTF1Q05048 431 aaKnown RBP14.24□□□□□ -0.13
LMNB1-203ENST00000460265 DSG2Q14126 1118 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 NKAIN2Q5VXU1 208 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 CNIH2Q6PI25 160 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 PRR22Q8IZ63 422 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 FAM26EQ8N5C1 309 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF563Q8TA94 476 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 PHOSPHO1Q8TCT1 267 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 PTP4A1Q93096 173 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 GABRG3Q99928 467 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 SIDT1Q9NXL6 827 aaKnown RBP14.24□□□□□ -0.13
LMNB1-203ENST00000460265 IL20Q9NYY1 176 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 SLC22A7Q9Y694 548 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 hCG_1807616A0A1W2PRN6 198 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 LGALS8O00214 317 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 CSTAP01040 98 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 CT62P0C5K7 136 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 DNASE1P24855 282 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 KIAA1024LP59773 190 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 SKP1P63208 163 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 HTR4Q13639 388 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 PGGHGQ32M88 737 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 FCRL6Q6DN72 434 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 SHISA6Q6ZSJ9 500 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 KRT74Q7RTS7 529 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 RADILQ96JH8 1075 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 SORCS2Q96PQ0 1159 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 MARVELD1Q9BSK0 173 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 UBQLN3Q9H347 655 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 HINT3Q9NQE9 182 aaKnown RBP14.24□□□□□ -0.13
LMNB1-203ENST00000460265 C20orf141Q9NUB4 165 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 NCOR1O75376 2440 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 PTP4A3O75365 173 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 EPPINO95925 133 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 APOC3P02656 99 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 OR1D4P47884 311 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 ENPP2Q13822 863 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 ACBD7Q8N6N7 88 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 DUSP18Q8NEJ0 188 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 OR11H4Q8NGC9 324 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 OR52E2Q8NGJ4 325 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 KLF15Q9UIH9 416 aa14.24□□□□□ -0.13
LMNB1-203ENST00000460265 CACNA1EQ15878 2313 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 A0A0A6YYJ9 748 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 A0A1B0GVT2 93 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 RCBTB2O95199 551 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 CFDP00746 253 aaPredicted RBP14.23□□□□□ -0.13
LMNB1-203ENST00000460265 ZP3P21754 424 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 STAT5AP42229 794 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 MLC1Q15049 377 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 P2RY14Q15391 338 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 HLA-DQA1Q5Y7H0 255 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 KANSL1Q7Z3B3 1105 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 MORN4Q8NDC4 146 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 OR5M3Q8NGP4 307 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 SNX33Q8WV41 574 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 ZMYND19Q96E35 227 aaPredicted RBP14.23□□□□□ -0.13
LMNB1-203ENST00000460265 TNFRSF13CQ96RJ3 184 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 Q9N2J8 555 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 COPZ2Q9P299 210 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 MED12Q93074 2177 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 CHP2O43745 196 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 RNH1P13489 461 aaKnown RBP14.23□□□□□ -0.13
LMNB1-203ENST00000460265 PRKAR1BP31321 381 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 SLC1A3P43003 542 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 RAB40BQ12829 278 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 MLLT11Q13015 90 aaPredicted RBP14.23□□□□□ -0.13
LMNB1-203ENST00000460265 C12orf73Q69YU5 71 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 ZAR1Q86SH2 424 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 MS4A15Q8N5U1 240 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF433Q8N7K0 673 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms