RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 TSPO2Q5TGU0 170 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 CYB5R2Q6BCY4 276 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 SSX8Q7RTT4 187 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 GRINAQ7Z429 371 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 MIPOL1Q8TD10 442 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 ROPN1LQ96C74 230 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 ZHX1-C8orf76Q96EF9 292 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 AMBRA1Q9C0C7 1298 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 SLC17A5Q9NRA2 495 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 FLVCR1Q9Y5Y0 555 aa16.23■□□□□ 0.19
HDAC11-216ENST00000458642 HEATR1Q9H583 2144 aaKnown RBP16.22■□□□□ 0.19
HDAC11-216ENST00000458642 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.22■□□□□ 0.192e-8■□□□□ 9.4
HDAC11-216ENST00000458642 ARFGEF3Q5TH69 2177 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 TMEM72A0PK05 275 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 RNASET2O00584 256 aaKnown RBP16.22■□□□□ 0.19
HDAC11-216ENST00000458642 GPR171O14626 319 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 ITM2AO43736 263 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 USF1P22415 310 aaPredicted RBP16.22■□□□□ 0.19
HDAC11-216ENST00000458642 EFNA4P52798 201 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 EMX2Q04743 252 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 PDCD2Q16342 344 aaPredicted RBP16.22■□□□□ 0.19
HDAC11-216ENST00000458642 MST1LQ2TV78 715 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 ZNF544Q6NX49 715 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 DEPDC4Q8N2C3 294 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 SAP130Q9H0E3 1048 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 CHODLQ9H9P2 273 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 EXD2Q9NVH0 621 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 TMEM160Q9NX00 188 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 TMEM181Q9P2C4 612 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 MOKQ9UQ07 419 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 SLC35A3Q9Y2D2 325 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 HDGFL3Q9Y3E1 203 aa16.22■□□□□ 0.19
HDAC11-216ENST00000458642 SPIN1Q9Y657 262 aaPredicted RBP16.22■□□□□ 0.19
HDAC11-216ENST00000458642 TMED7-TICAM2A0A0A6YYA0 188 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 KLF11O14901 512 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 MAGEA8P43361 318 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 KCNJ10P78508 379 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 GGTLC2Q14390 218 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 HIKESHIQ53FT3 197 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 SAXO2Q658L1 398 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 OR7E24Q6IFN5 339 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 FBXO17Q96EF6 278 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 SORCS2Q96PQ0 1159 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 SHARPINQ9H0F6 387 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 AKTIPQ9H8T0 292 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 ASIC5Q9NY37 505 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 NOP53Q9NZM5 478 aaKnown RBP16.21■□□□□ 0.19
HDAC11-216ENST00000458642 UPB1Q9UBR1 384 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 OSGIN1Q9UJX0 560 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 TMED7Q9Y3B3 224 aa16.21■□□□□ 0.19
HDAC11-216ENST00000458642 VWC2LB2RUY7 222 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 ANKRD28O15084 1053 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 DNPH1O43598 174 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 LMX1BO60663 402 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 BPGMP07738 259 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 CDH2P19022 906 aaPredicted RBP16.2■□□□□ 0.18
HDAC11-216ENST00000458642 APOBEC3AP31941 199 aaPredicted RBP16.2■□□□□ 0.18
HDAC11-216ENST00000458642 LSM11P83369 360 aaKnown RBP eCLIP16.2■□□□□ 0.18
HDAC11-216ENST00000458642 LGALS3BPQ08380 585 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 SLC17A1Q14916 467 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 GPAT3Q53EU6 434 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 ATAD3BQ5T9A4 648 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 AP1ARQ63HQ0 302 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 ARFGAP2Q8N6H7 521 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 ANKFN1Q8N957 763 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 ZIC4Q8N9L1 334 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 OR8J2Q8NGG1 315 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 PROX1Q92786 737 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 C3orf49Q96BT1 292 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 PKNOX2Q96KN3 472 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 ZNF385AQ96PM9 386 aaKnown RBP16.2■□□□□ 0.18
HDAC11-216ENST00000458642 C19orf24Q9BVV8 132 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 PRR14Q9BWN1 585 aa16.2■□□□□ 0.18
HDAC11-216ENST00000458642 EXOSC3Q9NQT5 275 aaKnown RBP16.2■□□□□ 0.18
HDAC11-216ENST00000458642 HMGN4O00479 90 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 UQCRC2P22695 453 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 TACR3P29371 465 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 SYPL1Q16563 259 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 SWI5Q1ZZU3 235 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 SPANXN4Q5MJ08 99 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 ZNF781Q8N8C0 355 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 ANKS4BQ8N8V4 417 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 EIF1ADQ8N9N8 165 aaKnown RBP16.19■□□□□ 0.18
HDAC11-216ENST00000458642 MSI2Q96DH6 328 aaKnown RBP16.19■□□□□ 0.18
HDAC11-216ENST00000458642 SOX7Q9BT81 388 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 C20orf27Q9GZN8 174 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 FKRPQ9H9S5 495 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 DCTN4Q9UJW0 460 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 TRAPPC4Q9Y296 219 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 SLC9A8Q9Y2E8 581 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 AMDHD2Q9Y303 409 aa16.19■□□□□ 0.18
HDAC11-216ENST00000458642 IGHV4-61A0A0C4DH41 118 aa16.18■□□□□ 0.18
HDAC11-216ENST00000458642 CHRM4P08173 479 aa16.18■□□□□ 0.18
HDAC11-216ENST00000458642 GUSBP08236 651 aa16.18■□□□□ 0.18
HDAC11-216ENST00000458642 SERPINB5P36952 375 aa16.18■□□□□ 0.18
HDAC11-216ENST00000458642 ETV4P43268 484 aa16.18■□□□□ 0.18
HDAC11-216ENST00000458642 CLK1P49759 484 aaKnown RBP16.18■□□□□ 0.18
HDAC11-216ENST00000458642 KHKP50053 298 aa16.18■□□□□ 0.18
HDAC11-216ENST00000458642 SLC35A1P78382 337 aa16.18■□□□□ 0.18
HDAC11-216ENST00000458642 CHRNB3Q05901 458 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms