RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FOSL2P15408 326 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ZNF19P17023 458 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ELK1P19419 428 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ERP29P30040 261 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 CAPZA2P47755 286 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 OR12D2P58182 307 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ACTC1P68032 377 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ACTA1P68133 377 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 POU4F2Q12837 409 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 IL18Q14116 193 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 EFR3AQ14156 821 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 TRIQKQ629K1 86 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 TCTE3Q8IZS6 198 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 BCORP1Q8N888 145 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 YIPF7Q8N8F6 280 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 C19orf18Q8NEA5 215 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 C16orf52Q8NHV5 167 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ZFAND1Q8TCF1 268 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ZC3HAV1LQ96H79 300 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 LRFN5Q96NI6 719 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ERMAPQ96PL5 475 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 TMEM43Q9BTV4 400 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 RPS6KB2Q9UBS0 482 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 SERINC4A6NH21 518 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 ERVH48-1M5A8F1 160 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 CLDN4O14493 209 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 MBTPS2O43462 519 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 NDUFB2O95178 105 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 PSKH1P11801 424 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 THBS2P35442 1172 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 HTR2BP41595 481 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 MAP2K3P46734 347 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 CAPZBP47756 277 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 FASLGP48023 281 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 FAPQ12884 760 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 TATDN3Q17R31 274 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 NDUFAF6Q330K2 333 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 DMKNQ6E0U4 476 aaPredicted RBP16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 SSX6Q7RTT6 188 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 PXKQ7Z7A4 578 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 DEFB123Q8N688 67 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 ZNF615Q8N8J6 731 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 C17orf47Q8NEP4 570 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 OR52E2Q8NGJ4 325 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 FAM174AQ8TBP5 190 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 SGTBQ96EQ0 304 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 PGLYRP3Q96LB9 341 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 ZNF578Q96N58 590 aaPredicted RBP16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 OR10A5Q9H207 317 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 UCK1Q9HA47 277 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 KLHL21Q9UJP4 597 aa16.87■□□□□ 0.29
SEMA3B-209ENST00000456560 A0A087WUJ7 227 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 ARHGEF9O43307 516 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 CLPSP04118 112 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 PROS1P07225 676 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 FAM157BP0CG42 384 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 MAOAP21397 527 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 GPR143P51810 404 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 GAS6Q14393 721 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 FAM209AQ5JX71 171 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 IDNKQ5T6J7 187 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 GLCCI1Q86VQ1 547 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 OR5J2Q8NH18 312 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 OR4C3Q8NH37 302 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 KCTD12Q96CX2 325 aaKnown RBP16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 KCNJ15Q99712 375 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 MKKSQ9NPJ1 570 aaPredicted RBP16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 ERVK-19Q9WJR5 959 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 ALG5Q9Y673 324 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 ZNF749O43361 778 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 WNT1P04628 370 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 HIST1H1CP16403 213 aaKnown RBP16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 GPLD1P80108 840 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 SLC3A1Q07837 685 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 NNATQ16517 81 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 FAM27D1Q5T7N8 215 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 CEACAM19Q7Z692 300 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 TPRA1Q86W33 373 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 FAM160A2Q8N612 972 aaPredicted RBP16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 ZSCAN1Q8NBB4 408 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 OR4K13Q8NH42 304 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 RLN3Q8WXF3 142 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 MSANTD3Q96H12 275 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 RBFOX1Q9NWB1 397 aaKnown RBP16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 ST6GALNAC2Q9UJ37 374 aa16.86■□□□□ 0.29
SEMA3B-209ENST00000456560 A0A0G2JK05 382 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 MCIDASD6RGH6 385 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 GNB5O14775 395 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 CSTAP01040 98 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 TFP02787 698 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 ALAS2P22557 587 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 HSD17B7P56937 341 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 NRG3P56975 720 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 GGTLC2Q14390 218 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 MZT2BQ6NZ67 158 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 RPTNQ6XPR3 784 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 SYT13Q7L8C5 426 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 LRRC17Q8N6Y2 441 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 TEX19Q8NA77 164 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms