RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 COPZ1P61923 177 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 CSNK2A1P68400 391 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-205ENST00000454542 SIRPAP78324 504 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 DUSP7Q16829 419 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 SLC15A3Q8IY34 581 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF295-AS1Q8N0V1 137 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 SLC43A2Q8N370 569 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 ROBO4Q8WZ75 1007 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 CMTM5Q96DZ9 223 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 C14orf79Q96F83 325 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 ECSITQ9BQ95 431 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 PSD2Q9BQI7 771 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 PRRG4Q9BZD6 226 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 GALNT8Q9NY28 637 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 TRAPPC4Q9Y296 219 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 MPDZO75970 2070 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 IGKV3D-15A0A087WSY6 115 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 A0A0B4J2E0 115 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 A0A1B0GX12 115 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 CCT8L1PA6NM43 557 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 M0QX08 132 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 NME4O00746 187 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 FMO6PO60774 539 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 ENPP1P22413 925 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 CCKARP32238 428 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 RGS8P57771 180 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-205ENST00000454542 H3F3AP84243 136 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 HOXC5Q00444 222 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 PDK3Q15120 406 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 NPTX1Q15818 432 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF474Q6S9Z5 364 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-205ENST00000454542 LUZP2Q86TE4 346 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 CADM2Q8N3J6 435 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 CNEP1R1Q8N9A8 125 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 SMYD1Q8NB12 490 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 DDIT4LQ96D03 193 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 LRRC46Q96FV0 321 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 HOPXQ9BPY8 73 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-205ENST00000454542 TACO1Q9BSH4 297 aaKnown RBP12.63□□□□□ -0.39
HDAC4-205ENST00000454542 RBM24Q9BX46 236 aaKnown RBP12.63□□□□□ -0.39
HDAC4-205ENST00000454542 POTEKPQ9BYX7 375 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 TRIM2Q9C040 744 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 PCDHAC1Q9H158 963 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 EFCAB1Q9HAE3 211 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 SLC24A3Q9HC58 644 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 TMEM181Q9P2C4 612 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 KLHL9Q9P2J3 617 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 KCNN3Q9UGI6 736 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 CLEC4AQ9UMR7 237 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 EMC9Q9Y3B6 208 aa12.63□□□□□ -0.39
HDAC4-205ENST00000454542 IGHV3-15A0A0B4J1V0 119 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 A0A1B0GWA3 101 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF716A6NP11 495 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF814B7Z6K7 855 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 SULT2B1O00204 365 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 AIM2O14862 343 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 DCTN3O75935 186 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 FAM107AO95990 144 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 UQCRC1P31930 480 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 NUDT2P50583 147 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 SLC7A2P52569 658 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 SLC16A1P53985 500 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 EGR4Q05215 589 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 GTF2IRD2BQ6EKJ0 949 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 PPP4R4Q6NUP7 873 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 GDF7Q7Z4P5 450 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 GTF2IRD2Q86UP8 949 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 MCEMP1Q8IX19 187 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 MICU2Q8IYU8 434 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 OR2T12Q8NG77 320 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 OR4D11Q8NGI4 311 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 STK35Q8TDR2 534 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 RASSF5Q8WWW0 418 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 CCT8L2Q96SF2 557 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF559Q9BR84 538 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 OPN3Q9H1Y3 402 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-205ENST00000454542 PIF1Q9H611 641 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 PLSCR4Q9NRQ2 329 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 KLHL28Q9NXS3 571 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 GMPR2Q9P2T1 348 aaKnown RBP12.62□□□□□ -0.39
HDAC4-205ENST00000454542 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 DCHS2Q6V1P9 2916 aa12.62□□□□□ -0.39
HDAC4-205ENST00000454542 CENPEQ02224 2701 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 IGKV1D-42A0A075B6H8 117 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 ELOVL7A1L3X0 281 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 LIPT2A6NK58 231 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF724A8MTY0 619 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 A8MVM7 634 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 FTCDNL1E5RQL4 147 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 M0R3H8 397 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 PRKD3O94806 890 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 PLGP00747 810 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-205ENST00000454542 TFPIP10646 304 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 CXCR1P25024 350 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 CPA2P48052 419 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 CTBP2P56545 445 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 NCALDP61601 193 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 SWT1Q5T5J6 900 aaKnown RBP12.61□□□□□ -0.39
HDAC4-205ENST00000454542 PAQR6Q6TCH4 344 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 TFAP2EQ6VUC0 442 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms