RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ZGLP1P0C6A0 271 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 CXCR1P25024 350 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 RPS5P46782 204 aaKnown RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 GBX2P52951 348 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 YIPF7Q8N8F6 280 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 NT5CQ8TCD5 201 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 FYTTD1Q96QD9 318 aaKnown RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 SP140LQ9H930 580 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 ASB6Q9NWX5 421 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 PAQR5Q9NXK6 330 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 FLRT3Q9NZU0 649 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 TMEM5Q9Y2B1 443 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 A0A0G2JMP0 313 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 A0A0X1KG70 313 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 SMLR1H3BR10 107 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 RNF13O43567 381 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 PRAMEF2O60811 474 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 RGS9O75916 674 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 TBXA2RP21731 343 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 CD1CP29017 333 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 EIF1AXP47813 144 aaKnown RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 PSG6Q00889 435 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 NIPAL3Q6P499 406 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 CBLN3Q6UW01 205 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 LINGO2Q7L985 606 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 BPHLQ86WA6 291 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 C17orf47Q8NEP4 570 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 OR4M2Q8NGB6 313 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 GCDHQ92947 438 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 ANKRD9Q96BM1 317 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 ABCG5Q9H222 651 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 TP63Q9H3D4 680 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 C12orf4Q9NQ89 552 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 MYEF2Q9P2K5 600 aaKnown RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 SLC35A3Q9Y2D2 325 aa11.02□□□□□ -0.64
SMPD4-213ENST00000454468 LSM2Q9Y333 95 aaKnown RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 SIRT4Q9Y6E7 314 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-213ENST00000454468 A0A075B6Q4 140 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 A0A1W2PPC4 97 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 BRINP1O60477 761 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 NDUFB2O95178 105 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 DCNP07585 359 aaKnown RBP11.02□□□□□ -0.65
SMPD4-213ENST00000454468 MSL3P1P0C860 447 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 DRD5P21918 477 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 MAP2K3P46734 347 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 AADACL4Q5VUY2 407 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 TSSK4Q6SA08 328 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM184AQ6ZMB5 413 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF550Q7Z398 422 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 RFLNBQ8N5W9 214 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 CLDN22Q8N7P3 220 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 PTP4A1Q93096 173 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 LYRM4Q9HD34 91 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 RANGRFQ9HD47 186 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-213ENST00000454468 SLC6A5Q9Y345 797 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 GPANK1O95872 356 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 IGKV1D-16P01601 117 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 SRP9P49458 86 aaKnown RBP11.02□□□□□ -0.65
SMPD4-213ENST00000454468 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
SMPD4-213ENST00000454468 FAM220AQ7Z4H9 259 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 KIAA1958Q8N8K9 716 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 OR14A2Q96R54 314 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM185BQ9H7F4 350 aa11.02□□□□□ -0.65
SMPD4-213ENST00000454468 TESQ9UGI8 421 aaKnown RBP11.02□□□□□ -0.65
SMPD4-213ENST00000454468 EP300Q09472 2414 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM129A0AVI4 362 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 ADAM11O75078 769 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 POU2F2P09086 479 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 CSF3P09919 207 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 OR8G3PP0DMU2 310 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM44Q2T9K0 475 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM201Q5SNT2 666 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 ULK3Q6PHR2 472 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 DNAJC5GQ8N7S2 189 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 MOSPD2Q8NHP6 518 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 TRMT10AQ8TBZ6 339 aaKnown RBP11.01□□□□□ -0.65
SMPD4-213ENST00000454468 GPBAR1Q8TDU6 330 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 ITPKCQ96DU7 683 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 G6PC3Q9BUM1 346 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 NXF5Q9H1B4 397 aaKnown RBP11.01□□□□□ -0.65
SMPD4-213ENST00000454468 HS3ST3A1Q9Y663 406 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 TP53BP1Q12888 1972 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-213ENST00000454468 C2orf16Q68DN1 1984 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 EIF1AYO14602 144 aaKnown RBP11.01□□□□□ -0.65
SMPD4-213ENST00000454468 XKRYO14609 159 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 SBK2P0C263 348 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 PPP3R1P63098 170 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 GRM7Q14831 915 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 AGAP6Q5VW22 663 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 TIGD4Q8IY51 512 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 NR4A3Q92570 626 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 AGAP4Q96P64 663 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 CCDC32Q9BV29 185 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 GRHPRQ9UBQ7 328 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 PLEKHB1Q9UF11 243 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-213ENST00000454468 SIGLEC7Q9Y286 467 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM72A0PK05 275 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 MAS1P04201 325 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms