RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SAMD4BQ5PRF9 694 aaKnown RBP25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 RBM45Q8IUH3 476 aaKnown RBP25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 GCNT2Q8N0V5 402 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 RNF148Q8N7C7 305 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 DNAJA4Q8WW22 397 aaPredicted RBP25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 PROX1Q92786 737 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 MCHR1Q99705 422 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 TMEM27Q9HBJ8 222 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 SH3GLB1Q9Y371 365 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 ZC3H12DA2A288 527 aaKnown RBP25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 SULT2B1O00204 365 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 DVL2O14641 736 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 PMS2P2O95744 297 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 OPRM1P35372 400 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 CSNK2A1P68400 391 aaPredicted RBP25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 BNIP2Q12982 314 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 FXNQ16595 210 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 SLC25A35Q3KQZ1 300 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 PPP4R4Q6NUP7 873 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 ULK3Q6PHR2 472 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 RELL2Q8NC24 303 aaPredicted RBP25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 VANGL1Q8TAA9 524 aaPredicted RBP25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 ROBO4Q8WZ75 1007 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 SFXN3Q9BWM7 321 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 POTEKPQ9BYX7 375 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 PCDHAC1Q9H158 963 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 PLEKHB1Q9UF11 243 aaPredicted RBP25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 EGFL7Q9UHF1 273 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 TRAPPC4Q9Y296 219 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 SLC9A8Q9Y2E8 581 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 PTPN13Q12923 2485 aa25.03■■□□□ 1.6
SMARCC1-203ENST00000454240 A0A0B4J2E0 115 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 A0A1B0GX12 115 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 FAM90A27PA6NNH2 459 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 A8MVM7 634 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 TNFSF13O75888 250 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 BMP5P22003 454 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 AGFG1P52594 562 aaKnown RBP25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 GUSBP1Q15486 140 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 SPATS1Q496A3 300 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 ALG10BQ5I7T1 473 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 EEF1A1P5Q5VTE0 462 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 RINLQ6ZS11 566 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 CARM1Q86X55 608 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 RNF128Q8TEB7 428 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 SLC38A4Q969I6 547 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 KCNJ16Q9NPI9 418 aa25.02■■□□□ 1.6
SMARCC1-203ENST00000454240 A0A1W2PNV4 684 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 NKX2-6A6NCS4 301 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 NPIPB7O75200 414 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 PNMTP11086 282 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 IMPDH2P12268 514 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 NCK1P16333 377 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 TNFRSF1BP20333 461 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 ENPP1P22413 925 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 ENTPD8Q5MY95 495 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 GTF2IRD2BQ6EKJ0 949 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 GLYATQ6IB77 296 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 ZNF613Q6PF04 617 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 CBLL1Q75N03 491 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 FCRLAQ7L513 359 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 GTF2IRD2Q86UP8 949 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 FAM156AQ8NDB6 213 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 STK35Q8TDR2 534 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 SLC47A1Q96FL8 570 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 TPD52L3Q96J77 140 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 ADPRHL2Q9NX46 363 aa25.01■■□□□ 1.59
SMARCC1-203ENST00000454240 ELOA3DA6NLF2 546 aaPredicted RBP25■■□□□ 1.59
SMARCC1-203ENST00000454240 DNPH1O43598 174 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 UBOX5O94941 541 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 KIR2DL2P43627 348 aaPredicted RBP25■■□□□ 1.59
SMARCC1-203ENST00000454240 TFF3Q07654 80 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 ELOA3BQ3SY89 546 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 TSPYL5Q86VY4 417 aaPredicted RBP25■■□□□ 1.59
SMARCC1-203ENST00000454240 ELOA3Q8NG57 546 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 LZICQ8WZA0 190 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 DNAJA3Q96EY1 480 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 GMPPAQ96IJ6 420 aaPredicted RBP25■■□□□ 1.59
SMARCC1-203ENST00000454240 C1orf21Q9H246 121 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 GLRX2Q9NS18 164 aa25■■□□□ 1.59
SMARCC1-203ENST00000454240 A0A087WUJ7 227 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 PRSS44E7EML9 344 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 SMAD9O15198 467 aaKnown RBP24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 SERPINA1P01009 418 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 TCN1P20061 433 aaPredicted RBP24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 CDH12P55289 794 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 EGR4Q05215 589 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 CEACAM7Q14002 265 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 RNPS1Q15287 305 aaKnown RBP24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 SWT1Q5T5J6 900 aaKnown RBP24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 SLC43A2Q8N370 569 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 FAM162AQ96A26 154 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 GORASP2Q9H8Y8 452 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 TAS2R1Q9NYW7 299 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 JKAMPQ9P055 326 aa24.99■■□□□ 1.59
SMARCC1-203ENST00000454240 IGHV3-15A0A0B4J1V0 119 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 CPSF4LA6NMK7 179 aaKnown RBP24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 SS18L1O75177 396 aaPredicted RBP24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 KLK2P20151 261 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 GRNP28799 593 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms