RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ZNF485Q8NCK3 441 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 DNAJA4Q8WW22 397 aaPredicted RBP10.78□□□□□ -0.68
VTA1-203ENST00000452973 ABCB9Q9NP78 766 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 SIRT4Q9Y6E7 314 aaPredicted RBP10.78□□□□□ -0.68
VTA1-203ENST00000452973 A3GALT2U3KPV4 340 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 FER1L5A0AVI2 2057 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 IGKV3D-11A0A0A0MRZ8 115 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 SLC22A31A6NKX4 558 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 E9PI62 339 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 SCO2O43819 266 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 TIAF1O95411 115 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 IL33O95760 270 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 IFNGP01579 166 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 SLC3A1Q07837 685 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 OR5M10Q6IEU7 315 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 QSOX2Q6ZRP7 698 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 ZNF554Q86TJ5 538 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 RFLNBQ8N5W9 214 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 OR6K6Q8NGW6 343 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 MOSPD2Q8NHP6 518 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 SMPDL3BQ92485 455 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 DAZLQ92904 295 aaKnown RBP10.78□□□□□ -0.68
VTA1-203ENST00000452973 SLC25A46Q96AG3 418 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 RASD2Q96D21 266 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 MVB12AQ96EY5 273 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 KATNB1Q9BVA0 655 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 CCDC86Q9H6F5 360 aaKnown RBP10.78□□□□□ -0.68
VTA1-203ENST00000452973 COMMD3Q9UBI1 195 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 A0A1W2PQL4 384 aaPredicted RBP10.77□□□□□ -0.68
VTA1-203ENST00000452973 TCRBV16S1A1N1A0A5B0 115 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 GABRPO00591 440 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 SIGLEC6O43699 453 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 IGKV3-11P04433 115 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 F13BP05160 661 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 ACVR1BP36896 505 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 AQP2P41181 271 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 OR12D2P58182 307 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 PLCXD2Q0VAA5 305 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 TOMM34Q15785 309 aaPredicted RBP10.77□□□□□ -0.68
VTA1-203ENST00000452973 LYPD4Q6UWN0 246 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 CMIPQ8IY22 773 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 NEIL3Q8TAT5 605 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 C4orf36Q96KX1 117 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 MOGAT1Q96PD6 335 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 CHRNA10Q9GZZ6 450 aa10.77□□□□□ -0.68
VTA1-203ENST00000452973 CACNA1CQ13936 2221 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 C2orf72A6NCS6 295 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 SBK2P0C263 348 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 TGM1P22735 817 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 GRPRP30550 384 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 GRK6P43250 576 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 CCL7P80098 99 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 DAB2P98082 770 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 SKP2Q13309 424 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 EBPQ15125 230 aaKnown RBP10.77□□□□□ -0.69
VTA1-203ENST00000452973 TBC1D25Q3MII6 688 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 WBP2NLQ6ICG8 309 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 ARHGAP11AQ6P4F7 1023 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 CCDC190Q86UF4 302 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 EID2Q8N6I1 236 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 ZPLD1Q8TCW7 415 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 ADIPOR1Q96A54 375 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 TBL1XR1Q9BZK7 514 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 TIGARQ9NQ88 270 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 TBCCD1Q9NVR7 557 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 BABAM2Q9NXR7 383 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 GRIP1Q9Y3R0 1128 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 MN1Q10571 1320 aaPredicted RBP10.77□□□□□ -0.69
VTA1-203ENST00000452973 TP53BP1Q12888 1972 aaPredicted RBP10.77□□□□□ -0.69
VTA1-203ENST00000452973 CCDC182A6NF36 153 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 PSMD9O00233 223 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 NDUFB5O43674 189 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 TACR3P29371 465 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 CD300CQ08708 224 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 HLA-BQ31612 363 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 WDR74Q6RFH5 385 aaPredicted RBP10.77□□□□□ -0.69
VTA1-203ENST00000452973 SSX6Q7RTT6 188 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 SLC29A4Q7RTT9 530 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 OR52N1Q8NH53 320 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 STT3BQ8TCJ2 826 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 ADGRL4Q9HBW9 690 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 NANSQ9NR45 359 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 MALT1Q9UDY8 824 aa10.77□□□□□ -0.69
VTA1-203ENST00000452973 ZNF346Q9UL40 294 aaKnown RBP10.77□□□□□ -0.69
VTA1-203ENST00000452973 IGKV1D-42A0A075B6H8 117 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 A0A1W2PQM1 296 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 ANKRD33BA6NCL7 494 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 FRG2CA6NGY1 282 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 SAGE2PA6NJ88 616 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 PATE3B3GLJ2 98 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 GDF9O60383 454 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 IL1AP01583 271 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 HLA-DPB1P04440 258 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 MST1P26927 711 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 EPHA8P29322 1005 aaPredicted RBP10.76□□□□□ -0.69
VTA1-203ENST00000452973 PYCR1P32322 319 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 E2F1Q01094 437 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 TP53I3Q53FA7 332 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 FAM27D1Q5T7N8 215 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms