RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 OPN1LWP04000 364 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 ZNF17P17021 662 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 CBLP22681 906 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 IGFBP5P24593 272 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 IFNGR2P38484 337 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 DAPP51397 102 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 ALDH3A2P51648 485 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 DLX5P56178 289 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 EGR4Q05215 589 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 SELENBP1Q13228 472 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 RNFT1Q5M7Z0 435 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 C3orf33Q6P1S2 294 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 IZUMO2Q6UXV1 221 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 ZER1Q7Z7L7 766 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 GALNT5Q7Z7M9 940 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 FAM109AQ8N4B1 249 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 PIGQQ9BRB3 760 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 TMEM43Q9BTV4 400 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 OSBPL10Q9BXB5 764 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 TSPAN10Q9H1Z9 355 aaPredicted RBP13.22□□□□□ -0.29
TNF-208ENST00000449264 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 SERINC1Q9NRX5 453 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 SPTA1P02549 2419 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 ATRXP46100 2492 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 C7orf72A4D263 438 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 MITFO75030 526 aaPredicted RBP13.21□□□□□ -0.29
TNF-208ENST00000449264 ALPLP05186 524 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 HPNP05981 417 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 TFPIP10646 304 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 ANXA8P13928 327 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 ZNF26P17031 533 aaPredicted RBP13.21□□□□□ -0.29
TNF-208ENST00000449264 ADH6P28332 368 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 SFTPDP35247 375 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 RPS5P46782 204 aaKnown RBP13.21□□□□□ -0.29
TNF-208ENST00000449264 AQP4P55087 323 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 HYAL4Q2M3T9 481 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.21□□□□□ -0.29
TNF-208ENST00000449264 NADK2Q4G0N4 442 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 SLC6A19Q695T7 634 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 PPP4R4Q6NUP7 873 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 FAHD1Q6P587 224 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 RNF113BQ8IZP6 322 aaKnown RBP13.21□□□□□ -0.29
TNF-208ENST00000449264 C10orf53Q8N6V4 93 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 BPIFA2Q96DR5 249 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.29
TNF-208ENST00000449264 PSD2Q9BQI7 771 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 SLC6A15Q9H2J7 730 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 KRT84Q9NSB2 600 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 PRDM4Q9UKN5 801 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 LHX6Q9UPM6 363 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 MGAT4BQ9UQ53 548 aa13.21□□□□□ -0.29
TNF-208ENST00000449264 SPIN1Q9Y657 262 aaPredicted RBP13.21□□□□□ -0.29
TNF-208ENST00000449264 SVILO95425 2214 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 A8MVM7 634 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 LRRN3E7EW58 273 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 EFNA2O43921 213 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 ADAP00813 363 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 SAGP10523 405 aaPredicted RBP13.21□□□□□ -0.3
TNF-208ENST00000449264 FUT1P19526 365 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 MAKP20794 623 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 ELK4P28324 431 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 GCKP35557 465 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 OMPP47874 163 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 B3GALT5-AS1P59052 145 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 PRKCDQ05655 676 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 TMEM44Q2T9K0 475 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 PLEKHN1Q494U1 663 aaPredicted RBP13.21□□□□□ -0.3
TNF-208ENST00000449264 SYT14P1Q58G82 188 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 C1orf94Q6P1W5 598 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 CDK20Q8IZL9 346 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 PACRGLQ8N7B6 248 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 DDIT4LQ96D03 193 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 GPA33Q99795 319 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 DEFB127Q9H1M4 99 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 ADNPQ9H2P0 1102 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 USE1Q9NZ43 259 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 TUBD1Q9UJT1 453 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 TMEM5Q9Y2B1 443 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 SLC6A5Q9Y345 797 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 ORC6Q9Y5N6 252 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 LIPGQ9Y5X9 500 aa13.21□□□□□ -0.3
TNF-208ENST00000449264 ZNF208O43345 1280 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 AHSA1O95433 338 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 CH25HO95992 272 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 HPRP00739 348 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 SHC1P29353 583 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 CTBP2P56545 445 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 GLYR1Q49A26 553 aaPredicted RBP13.2□□□□□ -0.3
TNF-208ENST00000449264 C1orf140Q5VVS0 124 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 KDM4DQ6B0I6 523 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 GNPDA2Q8TDQ7 276 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 SGTBQ96EQ0 304 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 ARL5BQ96KC2 179 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 DGCR6LQ9BY27 220 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 EXO5Q9H790 373 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 C8orf4Q9NR00 106 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
TNF-208ENST00000449264 QPCTLQ9NXS2 382 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms