RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ABCD2Q9UBJ2 740 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 EMC9Q9Y3B6 208 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ICE1Q9Y2F5 2266 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 SPTAN1Q13813 2472 aaKnown RBP12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 TEX15Q9BXT5 2789 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 A0A1B0GWA3 101 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 A0A1W2PNV4 684 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 A8MVM7 634 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 CXCR6O00574 342 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 FMO6PO60774 539 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 PMS2P2O95744 297 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 PNMTP11086 282 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 CD247P20963 164 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 CALB2P22676 271 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 DIO1P49895 249 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 OR2B6P58173 313 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 SIRPAP78324 504 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 FOXF2Q12947 444 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 MYBPHQ13203 477 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 RNPS1Q15287 305 aaKnown RBP12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 OR1Q1Q15612 314 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 CYBRD1Q53TN4 286 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 ALG10BQ5I7T1 473 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 ULK3Q6PHR2 472 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 FCRLAQ7L513 359 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 ATG4DQ86TL0 474 aaPredicted RBP12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 COMTD1Q86VU5 262 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 SLC43A2Q8N370 569 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 DNAJA3Q96EY1 480 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 GMPPAQ96IJ6 420 aaPredicted RBP12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 TPD52L3Q96J77 140 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 ARL5BQ96KC2 179 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 MCHR1Q99705 422 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 RSPO3Q9BXY4 272 aaPredicted RBP12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 TMEM181Q9P2C4 612 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 TRAPPC4Q9Y296 219 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 SH3GLB1Q9Y371 365 aa12.55□□□□□ -0.4
GTF3C3-206ENST00000448539 B2RBV5 119 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 DNPH1O43598 174 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 PRKD3O94806 890 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 COL8A1P27658 744 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 HTR2AP28223 471 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 IDUAP35475 653 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 ASCL1P50553 236 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 SLC35A1P78382 337 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 BNIP2Q12982 314 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 NRF1Q16656 503 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 SAMD4BQ5PRF9 694 aaKnown RBP12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 SP5Q6BEB4 398 aaPredicted RBP12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 FAM214BQ7L5A3 538 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 TRPM8Q7Z2W7 1104 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 CARM1Q86X55 608 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 DEFB107AQ8IZN7 70 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 RELL2Q8NC24 303 aaPredicted RBP12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 OR6T1Q8NGN1 323 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 RNF128Q8TEB7 428 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 FAM162AQ96A26 154 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 SLC47A1Q96FL8 570 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 CDRT15Q96T59 188 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 PRR14Q9BWN1 585 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 TAPBPLQ9BX59 468 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 POTEKPQ9BYX7 375 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 C12orf10Q9HB07 376 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 GMPR2Q9P2T1 348 aaKnown RBP12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 PACSIN3Q9UKS6 424 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 CLEC4AQ9UMR7 237 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 DOPEY1Q5JWR5 2465 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 ARHGAP21Q5T5U3 1957 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 PCNX1Q96RV3 2341 aa12.54□□□□□ -0.4
GTF3C3-206ENST00000448539 IGHV3-15A0A0B4J1V0 119 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 CPSF4LA6NMK7 179 aaKnown RBP12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 SS18L1O75177 396 aaPredicted RBP12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 TNFSF13O75888 250 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 AHSA1O95433 338 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 ZNF682O95780 498 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 GPIP06744 558 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 GRNP28799 593 aaKnown RBP12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 CRYBA2P53672 197 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 TMEM201Q5SNT2 666 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 C1orf140Q5VVS0 124 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 ZNF613Q6PF04 617 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 C6orf89Q6UWU4 347 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 LUZP2Q86TE4 346 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 RNF148Q8N7C7 305 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 STK35Q8TDR2 534 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 ABHD3Q8WU67 409 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 WFDC6Q9BQY6 131 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 NAA11Q9BSU3 229 aaPredicted RBP12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 PROCRQ9UNN8 238 aa12.53□□□□□ -0.4
GTF3C3-206ENST00000448539 UNC79Q9P2D8 2635 aa12.52□□□□□ -0.4
GTF3C3-206ENST00000448539 A0A0B4J2E0 115 aa12.52□□□□□ -0.41
GTF3C3-206ENST00000448539 A0A1B0GX12 115 aa12.52□□□□□ -0.41
GTF3C3-206ENST00000448539 ZC3H12DA2A288 527 aaKnown RBP12.52□□□□□ -0.41
GTF3C3-206ENST00000448539 TMEM229AB2RXF0 380 aa12.52□□□□□ -0.41
GTF3C3-206ENST00000448539 TPST2O60704 377 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms