RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ITGADQ13349 1161 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 DEFB113Q30KQ7 82 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 RPS26P11Q5JNZ5 115 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 PAGE3Q5JUK9 113 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 WBP2NLQ6ICG8 309 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 SSX8Q7RTT4 187 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 CXorf67Q86X51 503 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 TSPEARQ8WU66 669 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 POTEKPQ9BYX7 375 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 OR11A1Q9GZK7 315 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 VAPAQ9P0L0 249 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 CHST2Q9Y4C5 530 aa16.71■□□□□ 0.27
ATPAF2-201ENST00000444058 TMEM72A0PK05 275 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF716A6NP11 495 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 C5orf58C9J3I9 102 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 KLF4O43474 513 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 PGM3O95394 542 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 KLK2P20151 261 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 LOXP28300 417 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF311Q5JNZ3 666 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 CLIP4Q8N3C7 705 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 MAL2Q969L2 176 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 S100PBPQ96BU1 408 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF300Q96RE9 604 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF385DQ9H6B1 395 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 TMEM38AQ9H6F2 299 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 BEX4Q9NWD9 120 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 ITPR3Q14573 2671 aa16.7■□□□□ 0.26
ATPAF2-201ENST00000444058 EVPLLA8MZ36 301 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 ADAP00813 363 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 GKN3PP0CG01 181 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 ARAFP10398 606 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 CD53P19397 219 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 NCF2P19878 526 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 FPR1P21462 350 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 IL32P24001 234 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 CXCR1P25024 350 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 PRKAR1BP31321 381 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 GCNT6Q5T4J0 391 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 REEP3Q6NUK4 255 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 DLEU7Q6UYE1 221 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 DPP10Q8N608 796 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 HSD17B8Q92506 261 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 KISS1RQ969F8 398 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 PIP5K1AQ99755 562 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 NPHS2Q9NP85 383 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 MRGBPQ9NV56 204 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 LEF1Q9UJU2 399 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 DCTN4Q9UJW0 460 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 NDUFAF1Q9Y375 327 aa16.69■□□□□ 0.26
ATPAF2-201ENST00000444058 PRRC2AP48634 2157 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 IMPDH2P12268 514 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 CCNA2P20248 432 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 OR2B6P58173 313 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 CDK6Q00534 326 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 ACKR1Q16570 336 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 PAQR6Q6TCH4 344 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 C20orf204Q6ZNR8 217 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 KRT73Q86Y46 540 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF100Q8IYN0 542 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 PIGTQ969N2 578 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 HS3ST6Q96QI5 342 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 NAA11Q9BSU3 229 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 SPATA5L1Q9BVQ7 753 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 NGBQ9NPG2 151 aa16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 NOSIPQ9Y314 301 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-201ENST00000444058 A8MVM7 634 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 GPIP06744 558 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 PRG2P13727 222 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 COX5AP20674 150 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 IDUAP35475 653 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 FBXW9Q5XUX1 488 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 SERPINA11Q86U17 422 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 P2RY8Q86VZ1 359 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 TGIF2LYQ8IUE0 185 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 CADM2Q8N3J6 435 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 BHLHE22Q8NFJ8 381 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 APH1AQ96BI3 265 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 TMEM204Q9BSN7 226 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 IKZF5Q9H5V7 419 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 PIF1Q9H611 641 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 PARPBPQ9NWS1 579 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 PRSS50Q9UI38 385 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 FREM1Q5H8C1 2179 aa16.67■□□□□ 0.26
ATPAF2-201ENST00000444058 A0A0G2JND7 137 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 ZC3H12DA2A288 527 aaKnown RBP16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 LIPT2A6NK58 231 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 ANGPT2O15123 496 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 SLC6A2P23975 617 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 TAB1Q15750 504 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 RUNDC3AQ59EK9 446 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 DHRS4L2Q6PKH6 230 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 BHLHA15Q7RTS1 189 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 WFDC8Q8IUA0 241 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 CCDC103Q8IW40 242 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 C10orf111Q8N326 155 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 LSMEM1Q8N8F7 131 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 NFKBIDQ8NI38 313 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms