RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MCHR1Q99705 422 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 OCSTAMPQ9BR26 566 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ETV7Q9Y603 341 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ZC3H12DA2A288 527 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 OR1F1O43749 312 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 CPT2P23786 658 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ITGA3P26006 1051 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 CSF2RBP32927 897 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 HFEQ30201 348 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 LINC00303Q3SY05 128 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 TP53I3Q53FA7 332 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 FCRLBQ6BAA4 426 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 C1orf94Q6P1W5 598 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 RAB42Q8N4Z0 105 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 RXFP4Q8TDU9 374 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 C16orf58Q96GQ5 468 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ZCCHC3Q9NUD5 404 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 ATRXP46100 2492 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 EEF1E1-BLOC1S5C9J1V9 151 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 H3BNC9 293 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SFTA3P0C7M3 94 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PBX2P40425 430 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 DPPA2Q7Z7J5 298 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 OR52B4Q8NGK2 314 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 OR1S2Q8NGQ3 325 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 LRIG1Q96JA1 1093 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PAAF1Q9BRP4 392 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 RIOK2Q9BVS4 552 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 PLEKHA1Q9HB21 404 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SF3B6Q9Y3B4 125 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 TRBV5-4A0A0C4DH59 114 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 RAD1O60671 282 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 AKR1C3P42330 323 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 STXBP1P61764 594 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 BIKQ13323 160 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 GDF7Q7Z4P5 450 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PXKQ7Z7A4 578 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 OR6K6Q8NGW6 343 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 THEM6Q8WUY1 208 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 LINC01599Q8WXQ3 324 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 MICU1Q9BPX6 476 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 TGIF2Q9GZN2 237 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SUV39H2Q9H5I1 410 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 EXOGQ9Y2C4 368 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 ST8SIA5O15466 376 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 IGHA1P01876 353 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 BMP8BP34820 402 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 GJA5P36382 358 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 BEX5Q5H9J7 111 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 DPPA4Q7L190 304 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 BMP8AQ7Z5Y6 402 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 FOXRED1Q96CU9 486 aaPredicted RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 GPA33Q99795 319 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 KXD1Q9BQD3 176 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 MTHFD2LQ9H903 347 aaPredicted RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 ZNF408Q9H9D4 720 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 LOXHD1Q8IVV2 1947 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 TSTD3H0UI37 97 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ZNF749O43361 778 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 NDUFS6O75380 124 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 PMS2P2O95744 297 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PSMB10P40306 273 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 CSNK1DP48730 415 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 CLDN12P56749 244 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ARF5P84085 180 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF8Q5VWM4 474 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF7Q5VXH5 474 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 NR2C2APQ86WQ0 139 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 APCDD1Q8J025 514 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ZNF565Q8N9K5 539 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ACBD4Q8NC06 268 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ZBTB8AQ96BR9 441 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 HS6ST2Q96MM7 605 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PHB2Q99623 299 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 HCAR1Q9BXC0 346 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 FOXJ3Q9UPW0 622 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SH2B3Q9UQQ2 575 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SLC27A6Q9Y2P4 619 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PPP1R2P9O14990 202 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 MAGEB1P43366 347 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 CBFBQ13951 182 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ZNF674Q2M3X9 581 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 TCEAL6Q6IPX3 200 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 C12orf40Q86WS4 652 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PUSL1Q8N0Z8 303 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 C17orf47Q8NEP4 570 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 AKR7LQ8NHP1 331 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 FBXO17Q96EF6 278 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 OR14A2Q96R54 314 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ADAM2Q99965 735 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PAPOLGQ9BWT3 736 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 PDFQ9HBH1 243 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 ADAMTSL3P82987 1691 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 DOCK9Q9BZ29 2069 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SMAD6O43541 496 aaKnown RBP4.66□□□□□ -1.66
HERC1-201ENST00000443617 ADH6P28332 368 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 CTNNB1P35222 781 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 TAS2R38P59533 333 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 LPCAT3Q6P1A2 487 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 PAPD4Q6PIY7 484 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms