RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 OR12D1P0DN82 309 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 CCNA2P20248 432 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 USF1P22415 310 aaPredicted RBP7.3□□□□□ -1.24
TOP3B-209ENST00000442653 IGFBP5P24593 272 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 APOBEC1P41238 236 aaKnown RBP7.3□□□□□ -1.24
TOP3B-209ENST00000442653 EFNA4P52798 201 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 CLDN8P56748 225 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 PHC1P78364 1004 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 GUCA2AQ02747 115 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 MST1LQ2TV78 715 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 AP1ARQ63HQ0 302 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 OR7E24Q6IFN5 339 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 ZNF544Q6NX49 715 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 TNFAIP8L2Q6P589 184 aaPredicted RBP7.3□□□□□ -1.24
TOP3B-209ENST00000442653 CASP12Q6UXS9 341 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 FRRS1Q6ZNA5 592 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 IL17RELQ6ZVW7 336 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 GRINAQ7Z429 371 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 ANKRD46Q86W74 232 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 ADGRG3Q86Y34 549 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 PIGXQ8TBF5 258 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 MIPOL1Q8TD10 442 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 CNOT9Q92600 299 aaKnown RBP7.3□□□□□ -1.24
TOP3B-209ENST00000442653 ROPN1LQ96C74 230 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 TUBGCP3Q96CW5 907 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 SLC35G5Q96KT7 338 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 AMBRA1Q9C0C7 1298 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 SLC7A10Q9NS82 523 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 TMEM160Q9NX00 188 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 HDGFL3Q9Y3E1 203 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 WDR45Q9Y484 360 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 FLVCR1Q9Y5Y0 555 aa7.3□□□□□ -1.24
TOP3B-209ENST00000442653 TLDC2A0PJX2 215 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 ZC3H12DA2A288 527 aaKnown RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 VWC2LB2RUY7 222 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 RNASET2O00584 256 aaKnown RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 GPR171O14626 319 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 ANKRD28O15084 1053 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 DNPH1O43598 174 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 GUSBP08236 651 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 IMPDH2P12268 514 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 CREB1P16220 341 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 IDH2P48735 452 aaKnown RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 OR2B6P58173 313 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 KCNJ10P78508 379 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 EMX2Q04743 252 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 TSPO2Q5TGU0 170 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 CYB5R2Q6BCY4 276 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 DEPDC4Q8N2C3 294 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 ZIC4Q8N9L1 334 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 EIF1ADQ8N9N8 165 aaKnown RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 C1orf162Q8NEQ5 155 aaPredicted RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 OR8J2Q8NGG1 315 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 OR4A15Q8NGL6 344 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 KIF18AQ8NI77 898 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 ZNF563Q8TA94 476 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 TCP10LQ8TDR4 215 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 XAGE5Q8WWM1 108 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 PROX1Q92786 737 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 ZHX1-C8orf76Q96EF9 292 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 PPP1R36Q96LQ0 422 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 SORCS2Q96PQ0 1159 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 C19orf24Q9BVV8 132 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 SAP130Q9H0E3 1048 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 SHARPINQ9H0F6 387 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 CHODLQ9H9P2 273 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 EXOSC3Q9NQT5 275 aaKnown RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 SLC17A5Q9NRA2 495 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 EXD2Q9NVH0 621 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 ASIC5Q9NY37 505 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 TMEM181Q9P2C4 612 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 MOKQ9UQ07 419 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 TRAPPC4Q9Y296 219 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 SLC35A3Q9Y2D2 325 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 SPIN1Q9Y657 262 aaPredicted RBP7.29□□□□□ -1.24
TOP3B-209ENST00000442653 ATP23Q9Y6H3 246 aa7.29□□□□□ -1.24
TOP3B-209ENST00000442653 PKD1L1Q8TDX9 2849 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 TMED7-TICAM2A0A0A6YYA0 188 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 IGHV4-61A0A0C4DH41 118 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 TMEM72A0PK05 275 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 KLF11O14901 512 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 ITM2AO43736 263 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 LMX1BO60663 402 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 BPGMP07738 259 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 CSF3P09919 207 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 CDH2P19022 906 aaPredicted RBP7.28□□□□□ -1.24
TOP3B-209ENST00000442653 APOBEC3AP31941 199 aaPredicted RBP7.28□□□□□ -1.24
TOP3B-209ENST00000442653 SERPINB5P36952 375 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 NR4A2P43354 598 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 MAGEA8P43361 318 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 CLK1P49759 484 aaKnown RBP7.28□□□□□ -1.24
TOP3B-209ENST00000442653 SLC35A1P78382 337 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 CHRNB3Q05901 458 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 LGALS3BPQ08380 585 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 GGTLC2Q14390 218 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 SLC17A1Q14916 467 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 PDCD2Q16342 344 aaPredicted RBP7.28□□□□□ -1.24
TOP3B-209ENST00000442653 SWI5Q1ZZU3 235 aa7.28□□□□□ -1.24
TOP3B-209ENST00000442653 HIKESHIQ53FT3 197 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms