RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 CD180Q99467 661 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 WACQ9BTA9 647 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 SYNDIG1Q9H7V2 258 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 CDH10Q9Y6N8 788 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 U3KQ87 197 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 FREM2Q5SZK8 3169 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 CIB4A0PJX0 185 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 NCR1O76036 304 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 RAB36O95755 333 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 GLB1P16278 677 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 S1PR1P21453 382 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 GABRA4P48169 554 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 HSD17B7P56937 341 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 CDK5Q00535 292 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 SYT14P1Q58G82 188 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 RCBTB1Q8NDN9 531 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 OR8D4Q8NGM9 314 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM163Q8TC26 289 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 CNOT9Q92600 299 aaKnown RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 POLDIP3Q9BY77 421 aaKnown RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 DPH1Q9BZG8 443 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 DUSP15Q9H1R2 295 aaPredicted RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 OR10A5Q9H207 317 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 C12orf4Q9NQ89 552 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 DIMT1Q9UNQ2 313 aaKnown RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 CUL9Q8IWT3 2517 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 SNTNA6NMZ2 147 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 C17orf105B2RV13 164 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 CASKO14936 926 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 SAGP10523 405 aaPredicted RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 FABP5Q01469 135 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 ANGPT1Q15389 498 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 FCN2Q15485 313 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 KLHL22Q53GT1 634 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 C1orf189Q5VU69 101 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 QSOX2Q6ZRP7 698 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 RASSF6Q6ZTQ3 369 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 ESX1Q8N693 406 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 ZNF431Q8TF32 576 aaPredicted RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 GATAD2BQ8WXI9 593 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 NDC1Q9BTX1 674 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 B3GNT4Q9C0J1 378 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM27Q9HBJ8 222 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 AUP1Q9Y679 476 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 BLACEA4D250 179 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 H0YIG0 161 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 GTPBP1O00178 669 aaKnown RBP13.02□□□□□ -0.32
LIMD1-202ENST00000440097 SLC30A4O14863 429 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 FPR3P25089 353 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 EVX1P49640 407 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 POU4F3Q15319 338 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 SMARCD3Q6STE5 483 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 UBALD2Q8IYN6 164 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 ZFP41Q8N8Y5 198 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 PFN4Q8NHR9 129 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 MAFAQ8NHW3 353 aaPredicted RBP13.02□□□□□ -0.32
LIMD1-202ENST00000440097 PCNPQ8WW12 178 aaKnown RBP13.02□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM239Q8WW34 195 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 OSTF1Q92882 214 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 VSTM2LQ96N03 204 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 ELF4Q99607 663 aaPredicted RBP13.02□□□□□ -0.32
LIMD1-202ENST00000440097 KCNJ15Q99712 375 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 SLC7A5P2Q9GIP4 190 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 OR8D2Q9GZM6 311 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 MGAT4AQ9UM21 535 aa13.02□□□□□ -0.32
LIMD1-202ENST00000440097 SF3B6Q9Y3B4 125 aaKnown RBP13.02□□□□□ -0.32
LIMD1-202ENST00000440097 CPED1A4D0V7 1026 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 CDC42EP2O14613 210 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF749O43361 778 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 IGKV1D-16P01601 117 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 NAGAP17050 411 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 CTRB1P17538 263 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 FUT1P19526 365 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 RPS4Y1P22090 263 aaKnown RBP13.02□□□□□ -0.33
LIMD1-202ENST00000440097 MAP3K8P41279 467 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 CTBP2P56545 445 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 DBPQ10586 325 aaPredicted RBP13.02□□□□□ -0.33
LIMD1-202ENST00000440097 OCLNQ16625 522 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 CTRB2Q6GPI1 263 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 TMEM65Q6PI78 240 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 CDK20Q8IZL9 346 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 SENP5Q96HI0 755 aaPredicted RBP13.02□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF285Q96NJ3 590 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 ATF6BQ99941 703 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 FSCN3Q9NQT6 498 aa13.02□□□□□ -0.33
LIMD1-202ENST00000440097 ARID1BQ8NFD5 2236 aaPredicted RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 A0A0A6YYJ9 748 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 GNB5O14775 395 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 CHP2O43745 196 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 FOLR1P15328 257 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 GPR3P46089 330 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 GCGRP47871 477 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 WNT4P56705 351 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 FAM26EQ8N5C1 309 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 TOR1AIP2Q8NFQ8 470 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 CREB3L1Q96BA8 519 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 SAMD8Q96LT4 415 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms