RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SERPINA11Q86U17 422 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 CDC20BQ86Y33 519 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF100Q8IYN0 542 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 STEAP2Q8NFT2 490 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 STK35Q8TDR2 534 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 RASSF5Q8WWW0 418 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 ARL5BQ96KC2 179 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 WFIKKN1Q96NZ8 548 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 ECSITQ9BQ95 431 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 TRIM2Q9C040 744 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 C12orf10Q9HB07 376 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 TMEM27Q9HBJ8 222 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 NGBQ9NPG2 151 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 SAR1AQ9NR31 198 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 PARPBPQ9NWS1 579 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 NOSIPQ9Y314 301 aaKnown RBP9.32□□□□□ -0.92
MCF2L-216ENST00000439475 LOC100653049A0A140TA62 436 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 ELOA3DA6NLF2 546 aaPredicted RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 M0QX08 132 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 MRASO14807 208 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 MRPL33O75394 65 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 KRT34O76011 436 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 CNOT4O95628 575 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 FPR1P21462 350 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 CRYGSP22914 178 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 IL32P24001 234 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 DNASE1P24855 282 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 GTF2E2P29084 291 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 OR3A2P47893 321 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 MTPNP58546 118 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 PLAURQ03405 335 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 P2RY6Q15077 328 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 TRMT5Q32P41 509 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 ELOA3BQ3SY89 546 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 SFRP5Q5T4F7 317 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 ANKRD34AQ69YU3 496 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 TMEM225Q6GV28 225 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 C5orf46Q6UWT4 87 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 STAC2Q6ZMT1 411 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 SSX8Q7RTT4 187 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 PATL1Q86TB9 770 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 RETREG3Q86VR2 466 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 ARMC8Q8IUR7 673 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 ELOA3Q8NG57 546 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 OR52E4Q8NGH9 312 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 OR10A6Q8NH74 314 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 RP9Q8TA86 221 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 DNAJA4Q8WW22 397 aaPredicted RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 NINJ1Q92982 152 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 LRRC58Q96CX6 371 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 ZC3HAV1LQ96H79 300 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 OR11A1Q9GZK7 315 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 NSRP1Q9H0G5 558 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 TESQ9UGI8 421 aaKnown RBP9.31□□□□□ -0.92
MCF2L-216ENST00000439475 AP3M1Q9Y2T2 418 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 TESMINQ9Y4I5 508 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 CAPN7Q9Y6W3 813 aa9.31□□□□□ -0.92
MCF2L-216ENST00000439475 SETXQ7Z333 2677 aaKnown RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 IGKV3D-15A0A087WSY6 115 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 OR2T1O43869 369 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 MFN2O95140 757 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 VAMP5O95183 116 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 AHSA1O95433 338 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 IFNA14P01570 189 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 HRGP04196 525 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 C8BP07358 591 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 PNMTP11086 282 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 IMPDH2P12268 514 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 PRG2P13727 222 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 CD1EP15812 388 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 AQP1P29972 269 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 RGS8P57771 180 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ITGADQ13349 1161 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 CEACAM7Q14002 265 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 CAPRIN1Q14444 709 aaKnown RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 OR7A5Q15622 319 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 OTUD3Q5T2D3 398 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 REP15Q6BDI9 236 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ABLIM2Q6H8Q1 611 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 NANOGP8Q6NSW7 305 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 CGB2Q6NT52 195 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ERICH5Q6P6B1 374 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ULK3Q6PHR2 472 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 PAQR6Q6TCH4 344 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 TFAP2EQ6VUC0 442 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 NET1Q7Z628 596 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 RANBP3LQ86VV4 465 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 C10orf111Q8N326 155 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 LSMEM1Q8N8F7 131 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 OR8J3Q8NGG0 315 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 RNF217Q8TC41 542 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 C3orf49Q96BT1 292 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF775Q96BV0 537 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 DNAJA3Q96EY1 480 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 SLC47A1Q96FL8 570 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF317Q96PQ6 595 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF300Q96RE9 604 aaPredicted RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 SF3B5Q9BWJ5 86 aaKnown RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 ACTR6Q9GZN1 396 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms