RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 HNRNPA1L2Q32P51 320 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 KHDRBS2Q5VWX1 349 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 NIPAL3Q6P499 406 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SYT9Q86SS6 491 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 NRMQ8IXM6 262 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 PDZD9Q8IXQ8 264 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 EIF4E3Q8N5X7 224 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 NR4A3Q92570 626 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 KAT2AQ92830 837 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 MRPS24Q96EL2 167 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 NDC1Q9BTX1 674 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 CPEB1Q9BZB8 566 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 TPSD1Q9BZJ3 242 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ZCCHC3Q9NUD5 404 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 GPR55Q9Y2T6 319 aaPredicted RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 CXorf51AA0A1B0GTR3 108 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ABCD4O14678 606 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 PIP5K1CO60331 668 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 REM1O75628 298 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 OR2A4O95047 310 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 POP4O95707 220 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 EPXP11678 715 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 GABRA1P14867 456 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 CPN1P15169 458 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 P2RY2P41231 377 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 PRKAG1P54619 331 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ELFN2Q5R3F8 820 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 LINGO2Q7L985 606 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 TRMT11Q7Z4G4 463 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 ADCK2Q7Z695 626 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 NAXDQ8IW45 347 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 FAM160A2Q8N612 972 aaPredicted RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 TEX19Q8NA77 164 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 CHST14Q8NCH0 376 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 OR13C5Q8NGS8 318 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ELP4Q96EB1 424 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 OR2A7Q96R45 310 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 USB1Q9BQ65 265 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 RSPH9Q9H1X1 276 aaPredicted RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 ACSS1Q9NUB1 689 aaPredicted RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 NTMQ9P121 344 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SERGEFQ9UGK8 458 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SLC13A4Q9UKG4 626 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 OTOGLQ3ZCN5 2332 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 A0A0G2JPF8 293 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 A0A1B0GW55 424 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 A0A1W2PPK0 400 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 HNRNPCL3B7ZW38 293 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ARPC5O15511 151 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 KLF4O43474 513 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 KCNJ13O60928 360 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 KDM4BO94953 1096 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 CBX7O95931 251 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 HIST1H2ABP04908 130 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 DUX4L2P0CJ85 424 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 DUX4L3P0CJ86 424 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 DUX4L4P0CJ87 422 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 DUX4L5P0CJ88 424 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 DUX4L6P0CJ89 424 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 DUX4L7P0CJ90 424 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 HNRNPCL4P0DMR1 293 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 TRHRP34981 398 aaPredicted RBP7.9□□□□□ -1.14
HPS4-206ENST00000439453 GCGRP47871 477 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 TMEM115Q12893 351 aaPredicted RBP7.9□□□□□ -1.14
HPS4-206ENST00000439453 DECR1Q16698 335 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ZNF311Q5JNZ3 666 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 HENMT1Q5T8I9 393 aaKnown RBP7.9□□□□□ -1.14
HPS4-206ENST00000439453 RPTNQ6XPR3 784 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 HIST3H2AQ7L7L0 130 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ACOT11Q8WXI4 607 aaPredicted RBP7.9□□□□□ -1.14
HPS4-206ENST00000439453 HIST1H2ACQ93077 130 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 PGLYRP3Q96LB9 341 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 SLC38A3Q99624 504 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ARHGDIGQ99819 225 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 UBQLN3Q9H347 655 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ANKRD19PQ9H560 264 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 EVA1AQ9H8M9 152 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 NOX3Q9HBY0 568 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 DUX4Q9UBX2 424 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 NTNG1Q9Y2I2 539 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 TRAV1-2A0A0B4J238 106 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 SYNDIG1LA6NDD5 238 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 NAP1L6A6NFF2 107 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 FAM74A7A6NL05 159 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 J3QLW9 94 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 SDC3O75056 442 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ADRB1P08588 477 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ZNF19P17023 458 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 TAS2R43P59537 309 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 POLR2LP62875 67 aaKnown RBP7.9□□□□□ -1.14
HPS4-206ENST00000439453 FAM74A3Q4VXF1 159 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 FNDC3BQ53EP0 1204 aaKnown RBP7.9□□□□□ -1.14
HPS4-206ENST00000439453 NHLRC1Q6VVB1 395 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 C2orf73Q8N5S3 287 aaPredicted RBP7.9□□□□□ -1.14
HPS4-206ENST00000439453 OR5T2Q8NGG2 359 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 UQCC2Q9BRT2 126 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ARL6Q9H0F7 186 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 GLIPR2Q9H4G4 154 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 ZCCHC4Q9H5U6 513 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 PLEKHA1Q9HB21 404 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms