RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 MLC1Q15049 377 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 PLPPR5Q32ZL2 321 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 SGO1Q5FBB7 561 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 NKAPLQ5M9Q1 402 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 OR7E24Q6IFN5 339 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 CGB2Q6NT52 195 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 FAM180BQ6P0A1 224 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 SLC46A3Q7Z3Q1 461 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 MAVSQ7Z434 540 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 SPATA21Q7Z572 469 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 SVOPLQ8N434 492 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 ANKS4BQ8N8V4 417 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 C3orf30Q96M34 536 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 NPAS1Q99742 590 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 SUCNR1Q9BXA5 334 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 SRXN1Q9BYN0 137 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 RAB1BQ9H0U4 201 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 AKTIPQ9H8T0 292 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 NPHS2Q9NP85 383 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 TCF7L2Q9NQB0 619 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 MCM8Q9UJA3 840 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 GRIP1Q9Y3R0 1128 aa9.74□□□□□ -0.85
CSTF3-203ENST00000438862 A0A0G2JND7 137 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 A0A1W2PRB8 838 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 PEX11AO75192 247 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 COQ9O75208 318 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 SEC22BO75396 215 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 RAD51DO75771 328 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 UTS2O95399 124 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 JUNP05412 331 aaKnown RBP9.73□□□□□ -0.85
CSTF3-203ENST00000438862 HKR1P10072 659 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 EPHA3P29320 983 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 SFTPDP35247 375 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 ZNF155Q12901 538 aaPredicted RBP9.73□□□□□ -0.85
CSTF3-203ENST00000438862 GSTA3Q16772 222 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 SLC9B1Q4ZJI4 515 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 RFTN2Q52LD8 501 aaPredicted RBP9.73□□□□□ -0.85
CSTF3-203ENST00000438862 SPDYAQ5MJ70 313 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 C1QTNF12Q5T7M4 302 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 GKAP1Q5VSY0 366 aaPredicted RBP9.73□□□□□ -0.85
CSTF3-203ENST00000438862 APOOLQ6UXV4 268 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 COMMD6Q7Z4G1 85 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 ZNF100Q8IYN0 542 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 TOR1AIP2Q8NFQ8 470 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 OR9A2Q8NGT5 310 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 OR2T11Q8NH01 316 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 RFWD2Q8NHY2 731 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 SLC9A6Q92581 669 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 MUS81Q96NY9 551 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 SNX18Q96RF0 628 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 ELAC2Q9BQ52 826 aaKnown RBP9.73□□□□□ -0.85
CSTF3-203ENST00000438862 PSD2Q9BQI7 771 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 WDR55Q9H6Y2 383 aaPredicted RBP9.73□□□□□ -0.85
CSTF3-203ENST00000438862 Q9N2J8 555 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 MED17Q9NVC6 651 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 MED29Q9NX70 200 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 DCTN4Q9UJW0 460 aa9.73□□□□□ -0.85
CSTF3-203ENST00000438862 A6NJY4 79 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 CCT8L1PA6NM43 557 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ZNF724A8MTY0 619 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 B9A039 149 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ALG1L2C9J202 215 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 UBDO15205 165 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 CCDC22O60826 627 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ERCC1P07992 297 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 IDO1P14902 403 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 DAOP14920 347 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 DDX5P17844 614 aaKnown RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 EPHA1P21709 976 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ELK4P28324 431 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 TIA1P31483 386 aaKnown RBP eCLIP9.72□□□□□ -0.852e-8■■■■□ 26.3
CSTF3-203ENST00000438862 MPIP34949 423 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 SERPINF1P36955 418 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ASMTP46597 345 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 KHKP50053 298 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ATP4BP51164 291 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 IDH3GP51553 393 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 RASGEF1BQ0VAM2 473 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ZNHIT3Q15649 155 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 LSM12Q3MHD2 195 aaKnown RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 SAMD5Q5TGI4 173 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 FBXW9Q5XUX1 488 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 NOXRED1Q6NXP6 359 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 IKBIPQ70UQ0 350 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 GALNT5Q7Z7M9 940 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 C1orf52Q8N6N3 182 aaKnown RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 FNDC5Q8NAU1 212 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 PLPP7Q8NBV4 271 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 OR7G2Q8NG99 324 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 POC1BQ8TC44 478 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 C10orf82Q8WW14 230 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 NEU4Q8WWR8 484 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 TMEM186Q96B77 213 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 APIPQ96GX9 242 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 ZNF764Q96H86 408 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-203ENST00000438862 TMEM120AQ9BXJ8 343 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 RABEP2Q9H5N1 569 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 CXorf36Q9H7Y0 433 aa9.72□□□□□ -0.85
CSTF3-203ENST00000438862 C3orf14Q9HBI5 128 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms