RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 IQCA1Q86XH1 822 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 KIR3DL3Q8N743 410 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZDHHC22Q8N966 263 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 CLEC1AQ8NC01 280 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 NFAM1Q8NET5 270 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR2T34Q8NGX1 318 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 EXOC6Q8TAG9 804 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 LINC01560Q8TB33 94 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SMPDL3AQ92484 453 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 MRPS31Q92665 395 aaKnown RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 FRZBQ92765 325 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SNX21Q969T3 373 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 RBM18Q96H35 190 aaKnown RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 FER1L6-AS2Q96M78 137 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 RUFY1Q96T51 708 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 MLPHQ9BV36 600 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 SUCNR1Q9BXA5 334 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 NACAP1Q9BZK3 213 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 CUEDC2Q9H467 287 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 PXMP2Q9NR77 195 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 DNAJC17Q9NVM6 304 aaKnown RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 HPF1Q9NWY4 346 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 DCAF16Q9NXF7 216 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 RUVBL2Q9Y230 463 aaKnown RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 TET2Q6N021 2002 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 KIAA2026Q5HYC2 2103 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 TNCP24821 2201 aa1.81□□□□□ -2.12
HMGB1P18-201ENST00000438801 PHF3Q92576 2039 aaKnown RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SCN3AQ9NY46 2000 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 A0A096LNT2 108 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 TRAV19A0A0A6YYK7 116 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 A0A1B0GW55 424 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 URADA6NGE7 173 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF724A8MTY0 619 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 I3L4J1 428 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC33A1O00400 549 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SAP18O00422 153 aaKnown RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 POLR1CO15160 346 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR9G9P0C7N8 305 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DUX4L2P0CJ85 424 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DUX4L3P0CJ86 424 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DUX4L5P0CJ88 424 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DUX4L6P0CJ89 424 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DUX4L7P0CJ90 424 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SPP1P10451 314 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 IFNAR1P17181 557 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 ADRA2CP18825 462 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 IL10P22301 178 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DPP4P27487 766 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 HMGCLP35914 325 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 CD86P42081 329 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC1A3P43003 542 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 IER3P46695 156 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 CDX1P47902 265 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 POU3F4P49335 361 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 WNT4P56705 351 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 STX17P56962 302 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 TSPY1Q01534 308 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 C1orf61Q13536 156 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNHIT3Q15649 155 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 PHYHD1Q5SRE7 291 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 FAM91A1Q658Y4 838 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SHQ1Q6PI26 577 aaKnown RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DUX4L9Q6RFH8 374 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 FAM47EQ6ZV65 393 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC13A5Q86YT5 568 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 UNC45BQ8IWX7 931 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR8H3Q8N146 312 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 NUP93Q8N1F7 819 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF619Q8N2I2 560 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC43A2Q8N370 569 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SAMD12Q8N8I0 201 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 NAT8LQ8N9F0 302 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 CATSPER1Q8NEC5 780 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR2L5Q8NG80 312 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR11G2Q8NGC1 345 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR6C4Q8NGE1 309 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR2T3Q8NH03 318 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 TBCKQ8TEA7 893 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 RAD54LQ92698 747 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 FRAT1Q92837 279 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 C18orf25Q96B23 403 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 NTNG2Q96CW9 530 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 TSGA13Q96PP4 275 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 XPO6Q96QU8 1125 aaKnown RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 CYP2S1Q96SQ9 504 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 NPAS2Q99743 824 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 HES7Q9BYE0 225 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 CDC42EP4Q9H3Q1 356 aaKnown RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 CHMP4BQ9H444 224 aaKnown RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 AZI2Q9H6S1 392 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 UBE2TQ9NPD8 197 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DUX4Q9UBX2 424 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 SH3GLB1Q9Y371 365 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 KLK4Q9Y5K2 254 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 POMT1Q9Y6A1 747 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 IKBKGQ9Y6K9 419 aa1.8□□□□□ -2.12
HMGB1P18-201ENST00000438801 DNAH17Q9UFH2 4485 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms