RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ERMAPQ96PL5 475 aaPredicted RBP8.71□□□□□ -1.02
CUX1-206ENST00000437600 FYTTD1Q96QD9 318 aaKnown RBP8.71□□□□□ -1.02
CUX1-206ENST00000437600 MESP1Q9BRJ9 268 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 TTYH2Q9BSA4 534 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 NUFIP1Q9UHK0 495 aaKnown RBP8.71□□□□□ -1.02
CUX1-206ENST00000437600 ZNF223Q9UK11 482 aaPredicted RBP8.71□□□□□ -1.02
CUX1-206ENST00000437600 SIGLEC7Q9Y286 467 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 GSTK1Q9Y2Q3 226 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 MED31Q9Y3C7 131 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 OR10H1Q9Y4A9 318 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 RNF215Q9Y6U7 377 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 A3GALT2U3KPV4 340 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 SPACA6W5XKT8 324 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 TMEM129A0AVI4 362 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FAM172BPA6NC97 362 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CENPBD1B2RD01 187 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FAM25AB3EWG3 89 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FAM25CB3EWG5 89 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FAM25GB3EWG6 89 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PRR23D1E9PI22 279 aaPredicted RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 BLOC1S5-TXNDC5H3BN57 136 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PLA2G10O15496 165 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FOXS1O43638 330 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PLOD3O60568 738 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 WISP1O95388 367 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CFIP05156 583 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 DBIP07108 87 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 PRR23D2P0DMB1 279 aaPredicted RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 PEPDP12955 493 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 TDGF1P13385 188 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 HTR1FP30939 366 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 ETV6P41212 452 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 MLLT3P42568 568 aaPredicted RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 HNRNPKP61978 463 aaKnown RBP eCLIP8.7□□□□□ -1.021e-6■■■■□ 24.1
CUX1-206ENST00000437600 DSG2Q14126 1118 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 SLC25A30Q5SVS4 291 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 TCEAL6Q6IPX3 200 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CBLN3Q6UW01 205 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 QSOX2Q6ZRP7 698 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 ESPNLQ6ZVH7 1005 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CDK20Q8IZL9 346 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 SLC25A45Q8N413 288 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 LINC00471Q8N535 108 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 ACBD7Q8N6N7 88 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CLDN22Q8N7P3 220 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 BMPERQ8N8U9 685 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 ASCC1Q8N9N2 400 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 OR5M3Q8NGP4 307 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 OR4C6Q8NH72 309 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 TCEAL3Q969E4 200 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 SYNDIG1Q9H7V2 258 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 TMEM27Q9HBJ8 222 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 B3GAT2Q9NPZ5 323 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 R4GN57 208 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 KNTC1P50748 2209 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 LYPD3O95274 346 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PTTG1O95997 202 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 IL1AP01583 271 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 GABRA5P31644 462 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PSMB10P40306 273 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 KIR2DL3P43628 341 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FASLGP48023 281 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 NXPH1P58417 271 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 GLYR1Q49A26 553 aaPredicted RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 DDI2Q5TDH0 399 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 SIGIRRQ6IA17 410 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 KIRREL2Q6UWL6 708 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 NPSR1Q6W5P4 371 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 TTLL10Q6ZVT0 673 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 MEPCEQ7L2J0 689 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 MRGPREQ86SM8 312 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 Q8N402 240 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CADM4Q8NFZ8 388 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 OR5J2Q8NH18 312 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FOXN4Q96NZ1 517 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 GFM1Q96RP9 751 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 NMNAT3Q96T66 252 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 WACQ9BTA9 647 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 DUSP15Q9H1R2 295 aaPredicted RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 IER3IP1Q9Y5U9 82 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 SDK2Q58EX2 2172 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PCNX3Q9H6A9 2034 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 LANCL1O43813 399 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PIAS2O75928 621 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CRYZL1O95825 349 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PSKH1P11801 424 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 HIST1H1CP16403 213 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 RPL4P36578 427 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 ACAA2P42765 397 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 HTR3AP46098 478 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 CD83Q01151 205 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 LYSMD4Q5XG99 296 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 ALKBH2Q6NS38 261 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 NIPAL3Q6P499 406 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 ZNF517Q6ZMY9 492 aaPredicted RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 GDPGP1Q6ZNW5 385 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 SLC35F3Q8IY50 421 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 C10orf53Q8N6V4 93 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms