RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CDC20BQ86Y33 519 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 SVOPLQ8N434 492 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 KIR3DL3Q8N743 410 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR5D13Q8NGL4 314 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR13C2Q8NGS9 318 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 TYMSOSQ8TAI1 123 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 MYCBPQ99417 103 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZBTB18Q99592 522 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 CCT7Q99832 543 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC35A5Q9BS91 424 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRN3Q9H3W5 708 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 VCPKMTQ9H867 229 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 FN3KRPQ9HA64 309 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 MIEF1Q9NQG6 463 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC17A5Q9NRA2 495 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 NUDT15Q9NV35 164 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 IL36GQ9NZH8 169 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 DPM3Q9P2X0 92 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 PTBP2Q9UKA9 531 aaKnown RBP2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 HPCAL4Q9UM19 191 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 MEMO1Q9Y316 297 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 TIMM10BQ9Y5J6 103 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 IKBKGQ9Y6K9 419 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 IQGAP3Q86VI3 1631 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 ANKRD36BQ8N2N9 1353 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 GCC2Q8IWJ2 1684 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 ARHGEF28Q8N1W1 1705 aaKnown RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 KCPQ6ZWJ8 1503 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 A0A1W2PPE3 182 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 E9PLD3 99 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 RS1O15537 224 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 GPAA1O43292 621 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 FCMRO60667 390 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 NOL4O94818 638 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 LYPD3O95274 346 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 IGLL1P15814 213 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 ACADSP16219 412 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 SERPINA2P20848 420 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 PBLDP30039 288 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 NF2P35240 595 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 MDH2P40926 338 aaKnown RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 PTGDSP41222 190 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 MAP3K8P41279 467 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 MAGEA9P43362 315 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 KIR2DS2P43631 304 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 MEOX2P50222 304 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC25A1P53007 311 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CRYBB1P53674 252 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 AIF1P55008 147 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC8A3P57103 927 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 RPL32P62910 135 aaKnown RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 OC90Q02509 493 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 KLRB1Q12918 225 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 QRICH1Q2TAL8 776 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC22A6Q4U2R8 563 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 TP53I3Q53FA7 332 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 BEND3Q5T5X7 828 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 OLFML2AQ68BL7 652 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 LCA5Q86VQ0 697 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CLEC4FQ8N1N0 589 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR2L13Q8N349 312 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 BHLHE23Q8NDY6 225 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 STXBP6Q8NFX7 210 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR4D9Q8NGE8 314 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR51G2Q8NGK0 314 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR2A12Q8NGT7 310 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR2L2Q8NH16 312 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CCDC26Q8TAB7 109 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 MRAPQ8TCY5 172 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 TRUB1Q8WWH5 349 aaKnown RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 PSMG2Q969U7 264 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 HAVCR1Q96D42 359 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 SIGLEC12Q96PQ1 595 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CCNL2Q96S94 520 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CYP2S1Q96SQ9 504 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 NPAS2Q99743 824 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 SPATA16Q9BXB7 569 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CAPS2Q9BXY5 557 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 GLT8D2Q9H1C3 349 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CUTCQ9NTM9 273 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 PAK1IP1Q9NWT1 392 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 Q9UF83 564 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CLEC4AQ9UMR7 237 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 CA5BQ9Y2D0 317 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 ALG6Q9Y672 507 aa2.34□□□□□ -2.03
HMGB1P27-201ENST00000431429 RLFQ13129 1914 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 NRXN3Q9Y4C0 1643 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 SNTNA6NMZ2 147 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 F5H6K3 240 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 HCRTR1O43613 425 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 CXCL13O43927 109 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 PRKYO43930 277 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 B4GALT2O60909 372 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 SRSF10O75494 262 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 ECI2O75521 394 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 UGT2B17O75795 530 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 SNX4O95219 450 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 DBTP11182 482 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 POU2F1P14859 743 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms