RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TMEM107Q6UX40 140 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 GPRIN3Q6ZVF9 776 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 EIF3MQ7L2H7 374 aaKnown RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 NIPA1Q7RTP0 329 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 ASCL5Q7RTU5 278 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 LUZP2Q86TE4 346 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 TPRA1Q86W33 373 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 TGIF2LXQ8IUE1 241 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 ATP6V0D2Q8N8Y2 350 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 BBS1Q8NFJ9 593 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 OR2L2Q8NH16 312 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 LILRB4Q8NHJ6 448 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 MAGEE2Q8TD90 523 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 NPRL2Q8WTW4 380 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 TSEN15Q8WW01 171 aaKnown RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 TRUB1Q8WWH5 349 aaKnown RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 ELMO1Q92556 727 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 LRRC39Q96DD0 335 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF597Q96LX8 424 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 NOL4LQ96MY1 436 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 OR5B2Q96R09 309 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 CCT8L2Q96SF2 557 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 PSMB7Q99436 277 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF670Q9BS34 389 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 NIPSNAP3BQ9BS92 247 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 MRPL37Q9BZE1 423 aaKnown RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 SLC7A5P2Q9GIP4 190 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 IQCGQ9H095 443 aaKnown RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 DNTTIP1Q9H147 329 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 ANKRD19PQ9H560 264 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 ELL3Q9HB65 397 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 INPP5EQ9NRR6 644 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 AGPAT3Q9NRZ7 376 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 SLC7A10Q9NS82 523 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 PTTG3PQ9NZH4 202 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 PEF1Q9UBV8 284 aaKnown RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 RIMS3Q9UJD0 308 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 VANGL2Q9ULK5 521 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 TBC1D24Q9ULP9 559 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 PPIAL4AQ9Y536 164 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 NPTNQ9Y639 398 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 GRIN2DO15399 1336 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 RPAP1Q9BWH6 1393 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 CACNA1FO60840 1977 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 KIF27Q86VH2 1401 aa2.32□□□□□ -2.04
HMGB1P9-201ENST00000429856 RALGAPA1Q6GYQ0 2036 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 IGKV6D-41A0A0C4DH26 115 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 IGHV2-70DA0A0C4DH43 119 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 GABRR3A8MPY1 467 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 C9JVG2 144 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 F5H6K3 240 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CDX4O14627 284 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 LSM1O15116 133 aaKnown RBP2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 NMT2O60551 498 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 TRIM3O75382 744 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 SCRG1O75711 98 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CLDN9O95484 217 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 P04436 131 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CRYGCP07315 174 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 IVLP07476 585 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 GCFC2P16383 781 aaKnown RBP2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 SRMP19623 302 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 NPR2P20594 1047 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 LMO2P25791 158 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CD1BP29016 333 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CD1CP29017 333 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 OXTRP30559 389 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CDH5P33151 784 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 RPL13AP40429 203 aaKnown RBP2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 NAMPTP43490 491 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 ALDH3B2P48448 385 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 C21orf59P57076 290 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 DSCR10P59022 87 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 VLDLRP98155 873 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 OGDHQ02218 1023 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 IRF8Q02556 426 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 KLRC3Q07444 240 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 MESDQ14696 234 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 TGFBIQ15582 683 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CYP51A1Q16850 503 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 NKAIN1Q4KMZ8 207 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CARD16Q5EG05 197 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 BEND3Q5T5X7 828 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 C9orf66Q5T8R8 295 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 UFSP1Q6NVU6 142 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF343Q6P1L6 599 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 ARMCX5Q6P1M9 558 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 HSDL2Q6YN16 418 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 GCNT7Q6ZNI0 430 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 Q6ZSR3 168 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CENPQQ7L2Z9 268 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 CEACAM19Q7Z692 300 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 Q8N377 158 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 C15orf54Q8N8G6 183 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 MNS1Q8NEH6 495 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 OR52H1Q8NGJ2 320 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 OR6T1Q8NGN1 323 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 PAQR8Q8TEZ7 354 aa2.31□□□□□ -2.04
HMGB1P9-201ENST00000429856 AENQ8WTP8 325 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms