RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CASP12Q6UXS9 341 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 SPATA19Q7Z5L4 167 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 PRIMA1Q86XR5 153 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
TRIM39-209ENST00000428728 ZBTB18Q99592 522 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 TRAF4Q9BUZ4 470 aaPredicted RBP15.06■□□□□ 0
TRIM39-209ENST00000428728 CISD1Q9NZ45 108 aaKnown RBP15.06■□□□□ 0
TRIM39-209ENST00000428728 TMEM181Q9P2C4 612 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 TMEM120BA0PK00 339 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 TMEM72A0PK05 275 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 AGAP5A6NIR3 686 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 KIAA1324LA8MWY0 1029 aaPredicted RBP15.05■□□□□ -0
TRIM39-209ENST00000428728 GPR171O14626 319 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 DNPH1O43598 174 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 PGM3O95394 542 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 IGHV4-39P01824 125 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 IL7RP16871 459 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 RPS4Y1P22090 263 aaKnown RBP15.05■□□□□ -0
TRIM39-209ENST00000428728 TACR3P29371 465 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 NTF4P34130 210 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 MAGEA8P43361 318 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 HTR3AP46098 478 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 POLR2HP52434 150 aaKnown RBP15.05■□□□□ -0
TRIM39-209ENST00000428728 ETFDHQ16134 617 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 C9orf135Q5VTT2 229 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 NXNQ6DKJ4 435 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 LRRC74BQ6ZQY2 392 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 P2RY8Q86VZ1 359 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 CMIPQ8IY22 773 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 DDIT4LQ96D03 193 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 HS6ST2Q96MM7 605 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 SLCO5A1Q9H2Y9 848 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 ASB6Q9NWX5 421 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 TAS2R16Q9NYV7 291 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 OSGIN1Q9UJX0 560 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 GDF2Q9UK05 429 aaPredicted RBP15.05■□□□□ -0
TRIM39-209ENST00000428728 RAB21Q9UL25 225 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 GPR45Q9Y5Y3 372 aa15.05■□□□□ -0
TRIM39-209ENST00000428728 ZC3H12DA2A288 527 aaKnown RBP15.04■□□□□ -0
TRIM39-209ENST00000428728 HDAC3O15379 428 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 MRPL33O75394 65 aaKnown RBP15.04■□□□□ -0
TRIM39-209ENST00000428728 IMPDH2P12268 514 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 IDUAP35475 653 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 CLK1P49759 484 aaKnown RBP15.04■□□□□ -0
TRIM39-209ENST00000428728 SLC16A1P53985 500 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 FOXG1P55316 489 aaPredicted RBP15.04■□□□□ -0
TRIM39-209ENST00000428728 WDR4P57081 412 aaKnown RBP15.04■□□□□ -0
TRIM39-209ENST00000428728 KRTAP1-1Q07627 177 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 GNA13Q14344 377 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 AP1ARQ63HQ0 302 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 OR52E4Q8NGH9 312 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 SLC6A13Q9NSD5 602 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 FAIMQ9NVQ4 179 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 MALT1Q9UDY8 824 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 POU2F3Q9UKI9 436 aa15.04■□□□□ -0
TRIM39-209ENST00000428728 ABCA1O95477 2261 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 CFAP73A6NFT4 308 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 TRPC5OSA6NMA1 111 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 M0R1B8 84 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 RFXANKO14593 260 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 CD8AP01732 235 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 DBIP07108 87 aaKnown RBP15.03■□□□□ -0
TRIM39-209ENST00000428728 ITGA5P08648 1049 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 GKN3PP0CG01 181 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 FKBP2P26885 142 aaKnown RBP15.03■□□□□ -0
TRIM39-209ENST00000428728 SLC35A1P78382 337 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 TXNL4AP83876 142 aaKnown RBP15.03■□□□□ -0
TRIM39-209ENST00000428728 EPS8Q12929 822 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 SLC22A25Q6T423 547 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 TMEM108Q6UXF1 575 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 SSX8Q7RTT4 187 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 CROCCP2Q86T23 111 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 DTX2Q86UW9 622 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 VRK2Q86Y07 508 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 PEX5LQ8IYB4 626 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 REG4Q9BYZ8 158 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 MTHFD2LQ9H903 347 aaPredicted RBP15.03■□□□□ -0
TRIM39-209ENST00000428728 THAP1Q9NVV9 213 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 RLIMQ9NVW2 624 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 P2RX2Q9UBL9 471 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 TRAPPC4Q9Y296 219 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 FLVCR1Q9Y5Y0 555 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 SLC25A15Q9Y619 301 aa15.03■□□□□ -0
TRIM39-209ENST00000428728 YLPM1P49750 1951 aaKnown RBP15.03■□□□□ -0
TRIM39-209ENST00000428728 ALPK2Q86TB3 2170 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 JMJD1CQ15652 2540 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 ZNF208O43345 1280 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 SNNO75324 88 aaPredicted RBP15.02■□□□□ -0
TRIM39-209ENST00000428728 ANP32DO95626 131 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 KRT75O95678 551 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 BCHEP06276 602 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 ETFAP13804 333 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 UQCRBP14927 111 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 SLC1A3P43003 542 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 H3F3AP84243 136 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 DMTNQ08495 405 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 LRRC74AQ0VAA2 488 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 KLHL17Q6TDP4 642 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 ZNF836Q6ZNA1 936 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 GLB1L3Q8NCI6 653 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms