RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 HTR3AP46098 478 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 CSNK2A1P68400 391 aaPredicted RBP13.22□□□□□ -0.29
RTN4-210ENST00000427710 CYP51A1Q16850 503 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 REP15Q6BDI9 236 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 TFAP2EQ6VUC0 442 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 SNX32Q86XE0 403 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 SLC43A2Q8N370 569 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 DACH2Q96NX9 599 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 WFDC6Q9BQY6 131 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 MED18Q9BUE0 208 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 TMEM38AQ9H6F2 299 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 ARMCX1Q9P291 453 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 NDRG3Q9UGV2 375 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 PRSS50Q9UI38 385 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 CORO2BQ9UQ03 480 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 HDGFL3Q9Y3E1 203 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 GMEB1Q9Y692 573 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 LOC100653049A0A140TA62 436 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 A0A1W2PPR1 153 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 CASKO14936 926 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 ATP8B1O43520 1251 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 KRT34O76011 436 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 PMS2P2O95744 297 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 OPN1SWP03999 348 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 ETS2P15036 469 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 CXCR1P25024 350 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 COPZ1P61923 177 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 DMTNQ08495 405 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 MMEL1Q495T6 779 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 ABLIM2Q6H8Q1 611 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 STAC2Q6ZMT1 411 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 MTDHQ86UE4 582 aaKnown RBP13.21□□□□□ -0.29
RTN4-210ENST00000427710 CXorf67Q86X51 503 aaPredicted RBP13.21□□□□□ -0.29
RTN4-210ENST00000427710 LURAP1LQ8IV03 231 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 POU5F2Q8N7G0 328 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 SMYD1Q8NB12 490 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 HIPK4Q8NE63 616 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 OR10A6Q8NH74 314 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 TSPEARQ8WU66 669 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 C3orf49Q96BT1 292 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 DDIT4LQ96D03 193 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 KLHL14Q9P2G3 628 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 KLHL9Q9P2J3 617 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 USP22Q9UPT9 525 aa13.21□□□□□ -0.29
RTN4-210ENST00000427710 OTOGQ6ZRI0 2925 aa13.21□□□□□ -0.3
RTN4-210ENST00000427710 TEP1Q99973 2627 aaKnown RBP13.21□□□□□ -0.3
RTN4-210ENST00000427710 F8P00451 2351 aa13.21□□□□□ -0.3
RTN4-210ENST00000427710 ZNF208O43345 1280 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 HRGP04196 525 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 THBDP07204 575 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 PTNP21246 168 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 FPR1P21462 350 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 HTR2AP28223 471 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 PRKAR1BP31321 381 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
RTN4-210ENST00000427710 GYS2P54840 703 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 CEACAM7Q14002 265 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 OR7A5Q15622 319 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 RABL3Q5HYI8 236 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 ALKBH2Q6NS38 261 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 NANOGP8Q6NSW7 305 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 STK32CQ86UX6 486 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 KRT73Q86Y46 540 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 ARMC7Q9H6L4 198 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 NANOGQ9H9S0 305 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 BCO1Q9HAY6 547 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 ANGPT4Q9Y264 503 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 PLEKHA6Q9Y2H5 1048 aa13.2□□□□□ -0.3
RTN4-210ENST00000427710 FXYD1O00168 92 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 MRASO14807 208 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 GCM2O75603 506 aaPredicted RBP13.19□□□□□ -0.3
RTN4-210ENST00000427710 AKR7A3O95154 331 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 ADAP00813 363 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 IGHV3-9P01782 118 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 NTF4P34130 210 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 CLK1P49759 484 aaKnown RBP13.19□□□□□ -0.3
RTN4-210ENST00000427710 SEC24CP53992 1094 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 ZSWIM7Q19AV6 140 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 TRMT5Q32P41 509 aaKnown RBP13.19□□□□□ -0.3
RTN4-210ENST00000427710 ATG4DQ86TL0 474 aaPredicted RBP13.19□□□□□ -0.3
RTN4-210ENST00000427710 ARMC8Q8IUR7 673 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 TMEM99Q8N816 258 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 C11orf65Q8NCR3 313 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 LRRC58Q96CX6 371 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 PIK3IP1Q96FE7 263 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 ZNF607Q96SK3 696 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 ELAC2Q9BQ52 826 aaKnown RBP13.19□□□□□ -0.3
RTN4-210ENST00000427710 SPATA5L1Q9BVQ7 753 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 FAM107BQ9H098 131 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 KAT8Q9H7Z6 458 aaKnown RBP13.19□□□□□ -0.3
RTN4-210ENST00000427710 CAPN7Q9Y6W3 813 aa13.19□□□□□ -0.3
RTN4-210ENST00000427710 RAI1Q7Z5J4 1906 aaPredicted RBP13.18□□□□□ -0.3
RTN4-210ENST00000427710 LIPT2A6NK58 231 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms