RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MAP2K6P52564 334 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SOX8P57073 446 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 CXCR4P61073 352 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SNAPC1Q16533 368 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TIGD3Q6B0B8 471 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SPINK14Q6IE38 97 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 ACSM5Q6NUN0 579 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 C5orf46Q6UWT4 87 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TSPAN14Q8NG11 270 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 OR8D4Q8NGM9 314 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 KCNE4Q8WWG9 221 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 C1GALT1C1Q96EU7 318 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TMEM41AQ96HV5 264 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SERINC1Q9NRX5 453 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SCN3BQ9NY72 215 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 ZNF226Q9NYT6 803 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 CHRNA9Q9UGM1 479 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TRAV36DV7A0A075B6V5 113 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 A0A087WZY1 265 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TMEM72A0PK05 275 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 LRRN3E7EW58 273 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SNPHO15079 494 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 CBR3O75828 277 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 HIST1H2ABP04908 130 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 CCDC159P0C7I6 412 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 FMO3P31513 532 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 EIF1P41567 113 aaKnown RBP13.7□□□□□ -0.22
GINS3-203ENST00000426538 DLX5P56178 289 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 CSNK2BP67870 215 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TUBA3CQ13748 450 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 ZNF74Q16587 644 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 PLPPR5Q32ZL2 321 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SLC25A53Q5H9E4 307 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TUBA3EQ6PEY2 450 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 HIST3H2AQ7L7L0 130 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SLC43A2Q8N370 569 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 LRRC17Q8N6Y2 441 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 ZNF248Q8NDW4 579 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 OR8J1Q8NGP2 316 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 STK35Q8TDR2 534 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 HIST1H2ACQ93077 130 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 KTI12Q96EK9 354 aaPredicted RBP13.7□□□□□ -0.22
GINS3-203ENST00000426538 Q96MT0 163 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 GNRHR2Q96P88 292 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 IL4I1Q96RQ9 567 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 CLN6Q9NWW5 311 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 GPR83Q9NYM4 423 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 TPRKBQ9Y3C4 175 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 EML6Q6ZMW3 1958 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 ETV2O00321 342 aaPredicted RBP13.69□□□□□ -0.22
GINS3-203ENST00000426538 SLC1A7O00341 560 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 KLK10O43240 276 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 WDPCPO95876 746 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 HMGN1P05114 100 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 WT1P19544 449 aaPredicted RBP13.69□□□□□ -0.22
GINS3-203ENST00000426538 CNR1P21554 472 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 CRHBPP24387 322 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 DPP4P27487 766 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 ADH6P28332 368 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 PCYT1AP49585 367 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 CCL11P51671 97 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 DSCR4P56555 118 aaPredicted RBP13.69□□□□□ -0.22
GINS3-203ENST00000426538 FOXF1Q12946 379 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 BLMHQ13867 455 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 SLC46A3Q7Z3Q1 461 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 TCEANCQ8N8B7 351 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 LIPHQ8WWY8 451 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 TAAR8Q969N4 342 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 ZBTB8AQ96BR9 441 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 NTNG2Q96CW9 530 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 DDIT4LQ96D03 193 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 PLEKHA8Q96JA3 519 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 POLDIP3Q9BY77 421 aaKnown RBP13.69□□□□□ -0.22
GINS3-203ENST00000426538 UBQLN3Q9H347 655 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 HRH3Q9Y5N1 445 aa13.69□□□□□ -0.22
GINS3-203ENST00000426538 PTGES3LE9PB15 166 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 BLOC1S5-TXNDC5H3BN57 136 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 M0R129 80 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 TLX2O43763 284 aaPredicted RBP13.68□□□□□ -0.22
GINS3-203ENST00000426538 OR2T1O43869 369 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 TRIM3O75382 744 aaPredicted RBP13.68□□□□□ -0.22
GINS3-203ENST00000426538 WBP4O75554 376 aaKnown RBP13.68□□□□□ -0.22
GINS3-203ENST00000426538 NDUFB2O95178 105 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 AHSA1O95433 338 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 ATP6V1B1P15313 513 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 SLC6A6P31641 620 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 DNASE1L1P49184 302 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 PRPS1P60891 318 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 SNRPGP62308 76 aaKnown RBP13.68□□□□□ -0.22
GINS3-203ENST00000426538 TEKQ02763 1124 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 CDC20Q12834 499 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 TOMM20Q15388 145 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 OR1C1Q15619 314 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.68□□□□□ -0.22
GINS3-203ENST00000426538 PGGHGQ32M88 737 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 ANKDD1AQ495B1 522 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 FAM69AQ5T7M9 428 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 LAIR2Q6ISS4 152 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms