RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ERP29P30040 261 aaKnown RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 VEGFCP49767 419 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ARPC4P59998 168 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ARF3P61204 181 aaPredicted RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 GPR18Q14330 331 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 RASSF6Q6ZTQ3 369 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 MEPCEQ7L2J0 689 aaKnown RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 COQ8AQ8NI60 647 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 SETD6Q8TBK2 473 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 LRRC20Q8TCA0 184 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 LMF1Q96S06 567 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 TMEM43Q9BTV4 400 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 FXYD6Q9H0Q3 95 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 KCNK15Q9H427 330 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 PRDM9Q9NQV7 894 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 TESQ9UGI8 421 aaKnown RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 PRR19A6NJB7 356 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ARPC1BO15143 372 aaKnown RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 RFPL3O75679 317 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 CT62P0C5K7 136 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 GDI2P50395 445 aaKnown RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 SLC35D2Q76EJ3 337 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 GIMAP1Q8WWP7 306 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 OR2M4Q96R27 311 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 POT1Q9NUX5 634 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 SERTM1A2A2V5 107 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 EIF1AYO14602 144 aaKnown RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 SDC3O75056 442 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 ZNF780AO75290 641 aaPredicted RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 RGS11O94810 467 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 ALDOBP05062 364 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 IGFALSP35858 605 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 TPBGQ13641 420 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 CCINQ13939 588 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 LINC00299Q6ZSB3 139 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 TMPRSS12Q86WS5 348 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 FAM3CQ92520 227 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 ZC4H2Q9NQZ6 224 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 CALML5Q9NZT1 146 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 SIGLEC5O15389 551 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 HCRTR1O43613 425 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 HTR2AP28223 471 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 PON3Q15166 354 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 ZNHIT3Q15649 155 aaPredicted RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 BICRALQ6AI39 1079 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 MBOAT2Q6ZWT7 520 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 OR6N2Q8NGY6 317 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 APOBEC4Q8WW27 367 aaKnown RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 DVL3Q92997 716 aaPredicted RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 PTP4A1Q93096 173 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 MENTQ9BUN1 341 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 ASB6Q9NWX5 421 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 RDH8Q9NYR8 311 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 FBXL3Q9UKT7 428 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 DSPPQ9NZW4 1301 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 DMDP11532 3685 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 A0A1B0GWA3 101 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 PRSS38A1L453 326 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 RCBTB2O95199 551 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 PEBP1P30086 187 aaKnown RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 EMDP50402 254 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 POU6F2P78424 691 aaPredicted RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 GAS6Q14393 721 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 AMZ1Q400G9 498 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 PRAMEF17Q5VTA0 474 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 VN1R4Q7Z5H5 301 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 LNX2Q8N448 690 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 AVL9Q8NBF6 648 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 TTLQ8NG68 377 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 MAP6Q96JE9 813 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 ADAD1Q96M93 576 aaKnown RBP12.34□□□□□ -0.43
USP42-203ENST00000426246 MS4A4EQ96PG1 132 aa12.34□□□□□ -0.43
USP42-203ENST00000426246 TMEM265A0A087WTH1 108 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 TMEM72A0PK05 275 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 MBTPS2O43462 519 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 GZMKP49863 264 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 RPS21P63220 83 aaKnown RBP12.33□□□□□ -0.44
USP42-203ENST00000426246 BTG2P78543 158 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 ILF3Q12906 894 aaKnown RBP eCLIP12.33□□□□□ -0.44
USP42-203ENST00000426246 ZNF676Q8N7Q3 588 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 OR7G1Q8NGA0 311 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 OR51J1Q9H342 316 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 NOX4Q9NPH5 578 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 LRP4O75096 1905 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 TMEM129A0AVI4 362 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 KDM4BO94953 1096 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 CSTAP01040 98 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 H2AFB2P0C5Z0 115 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 ZGLP1P0C6A0 271 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 NPR2P20594 1047 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 MAOAP21397 527 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 DRD1P21728 446 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms