RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 A0A0X1KG70 313 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 A0A1B0GWA3 101 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 ZSCAN5BA6NJL1 495 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 RHPN2P1A8MT19 583 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 J3QRE1 110 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 BRINP1O60477 761 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 HCN1O60741 890 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 GALR3O60755 368 aaPredicted RBP9.82□□□□□ -0.84
CUX1-205ENST00000425244 TDGF1P13385 188 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 ARRB1P49407 418 aaPredicted RBP9.82□□□□□ -0.84
CUX1-205ENST00000425244 EMDP50402 254 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 OR10A3P58181 314 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 PLAURQ03405 335 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 ACSM1Q08AH1 577 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 TATDN3Q17R31 274 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 GARNL3Q5VVW2 1013 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 MZT2BQ6NZ67 158 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 CEACAM19Q7Z692 300 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 OAFQ86UD1 273 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 WDR5BQ86VZ2 330 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 RNF113BQ8IZP6 322 aaKnown RBP9.82□□□□□ -0.84
CUX1-205ENST00000425244 OR4M2Q8NGB6 313 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 OR51L1Q8NGJ5 315 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 TNFRSF13CQ96RJ3 184 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 STACQ99469 402 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 TEAD3Q99594 435 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 ELF4Q99607 663 aaPredicted RBP9.82□□□□□ -0.84
CUX1-205ENST00000425244 NDC1Q9BTX1 674 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 C12orf10Q9HB07 376 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 CMC2Q9NRP2 79 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 HCN3Q9P1Z3 774 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 LRIT1Q9P2V4 623 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 ADAM30Q9UKF2 790 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 CLEC4AQ9UMR7 237 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 SIGLEC7Q9Y286 467 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 A0A087WV62 115 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 A0A0J9YY10 115 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 A0A1W2PPK0 400 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 OR2W5A6NFC9 320 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 SLC22A31A6NKX4 558 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 MAGEB4O15481 346 aaPredicted RBP9.82□□□□□ -0.84
CUX1-205ENST00000425244 LYRM1O43325 122 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 MT-ND5P03915 603 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 OR12D2P58182 307 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 CRYZQ08257 329 aaKnown RBP9.82□□□□□ -0.84
CUX1-205ENST00000425244 MGAT2Q10469 447 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 ASB18Q6ZVZ8 466 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 SAMD12Q8N8I0 201 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 C17orf47Q8NEP4 570 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 TGM7Q96PF1 710 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 GFM1Q96RP9 751 aaKnown RBP9.82□□□□□ -0.84
CUX1-205ENST00000425244 TIMP4Q99727 224 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 PLSCR3Q9NRY6 295 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 FLRT3Q9NZU0 649 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 GMEB2Q9UKD1 530 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 TMEM5Q9Y2B1 443 aa9.82□□□□□ -0.84
CUX1-205ENST00000425244 CCDC163A0A0D9SF12 145 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 OR5K3A6NET4 321 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 ADAM11O75078 769 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 B3GALNT1O75752 331 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 CBX7O95931 251 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 ZNF3P17036 446 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 PYCR1P32322 319 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 HCCSP53701 268 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 GFERP55789 205 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 GALEQ14376 348 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 ALG10BQ5I7T1 473 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 SLC51BQ86UW2 128 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 FAM98AQ8NCA5 519 aaKnown RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 OR13C5Q8NGS8 318 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 SMPDL3BQ92485 455 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 ANKRD9Q96BM1 317 aaPredicted RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 AHCYL2Q96HN2 611 aaKnown RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 ZNF559Q9BR84 538 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 TMEM43Q9BTV4 400 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 GTPBP2Q9BX10 602 aaKnown RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 FN3KQ9H479 309 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 FAM60AQ9NP50 221 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 RBFOX1Q9NWB1 397 aaKnown RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 PILRBQ9UKJ0 227 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 RASD1Q9Y272 281 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 SLC35A3Q9Y2D2 325 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 DMXL1Q9Y485 3027 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 A0A0A6YYC8 382 aaPredicted RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 A0A1W2PRG6 482 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 I3L1I5 382 aaPredicted RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 HRKO00198 91 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 SERPINI2O75830 405 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 ST6GAL1P15907 406 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 TALDO1P37837 337 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 OR1D5P58170 312 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 HLA-BQ31612 363 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 NDUFAF6Q330K2 333 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 TMPRSS11FQ6ZWK6 438 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 RFLNBQ8N5W9 214 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 OR4K13Q8NH42 304 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 ZMYND19Q96E35 227 aaPredicted RBP9.81□□□□□ -0.84
CUX1-205ENST00000425244 PEX11GQ96HA9 241 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 SNX18Q96RF0 628 aa9.81□□□□□ -0.84
CUX1-205ENST00000425244 MAP3K3Q99759 626 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms