RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 KALRNO60229 2985 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 TRAV36DV7A0A075B6V5 113 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 TMED7-TICAM2A0A0A6YYA0 188 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 C17orf51A8MQB3 221 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 FAM47E-STBD1D6RA91 191 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 OR2T1O43869 369 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 MITFO75030 526 aaPredicted RBP12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 NUDT14O95848 222 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 MT-ATP6P00846 226 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 CD46P15529 392 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 CHMP24386 653 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 TNFSF10P50591 281 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 RPS4XP62701 263 aaKnown RBP12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 CDK5Q00535 292 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 MFSD13AQ14CX5 517 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 DEFB109BQ30KR1 87 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 C6orf52Q5T4I8 152 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 PRAMEF20Q5VT98 475 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 SPINK14Q6IE38 97 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 SLC25A25Q6KCM7 469 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 PCSK4Q6UW60 755 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF620Q6ZNG0 422 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZFP62Q8NB50 900 aaPredicted RBP12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 TRUB1Q8WWH5 349 aaKnown RBP12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 OSTF1Q92882 214 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 GTPBP3Q969Y2 492 aaKnown RBP12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 SLC25A19Q9HC21 320 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 C20orf141Q9NUB4 165 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 CHRNA9Q9UGM1 479 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 TMED7Q9Y3B3 224 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 HRH3Q9Y5N1 445 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 NINQ8N4C6 2090 aa12.91□□□□□ -0.34
SHMT1P1-201ENST00000419974 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 KLRC4-KLRK1H3BQV0 150 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZIC3O60481 467 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 GLSO94925 669 aaPredicted RBP12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 RCBTB2O95199 551 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 ASAH2BP0C7U1 165 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 IFI30P13284 250 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 FHL1Q13642 323 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 PTGES3Q15185 160 aaKnown RBP12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF74Q16587 644 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF691Q5VV52 312 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 OR5M10Q6IEU7 315 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 ARSKQ6UWY0 536 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 SETD9Q8NE22 299 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 OR2M7Q8NG81 312 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 POC1BQ8TC44 478 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 TM9SF4Q92544 642 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 SGTBQ96EQ0 304 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 FAM46AQ96IP4 442 aaKnown RBP12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 MFRPQ9BY79 579 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 OR2B2Q9GZK3 357 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 FKRPQ9H9S5 495 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 DEPPQ9NTK1 212 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF229Q9UJW7 825 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 SIGLEC7Q9Y286 467 aa12.9□□□□□ -0.34
SHMT1P1-201ENST00000419974 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 EFCAB9A8MZ26 197 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 CDC42EP2O14613 210 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 SUSD5O60279 629 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 HPNP05981 417 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 POU2F1P14859 743 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 MAKP20794 623 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 DPP4P27487 766 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 GGT2P36268 569 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 POLR2IP36954 125 aaKnown RBP12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 GIPRP48546 466 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 MASP1P48740 699 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 CCL11P51671 97 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 NUP107P57740 925 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 ISL1P61371 349 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 EFNB1P98172 346 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 CRYZQ08257 329 aaKnown RBP12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 SELENBP1Q13228 472 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 INPP5JQ15735 1006 aaPredicted RBP12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLC25A30Q5SVS4 291 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 FAM69AQ5T7M9 428 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 LINC00696Q6ZRV3 163 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLC46A3Q7Z3Q1 461 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 GALNT5Q7Z7M9 940 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 TMEM178AQ8NBL3 297 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 PFN4Q8NHR9 129 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 GNRHR2Q96P88 292 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 GPX7Q96SL4 187 aaPredicted RBP12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 APOL4Q9BPW4 351 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 PIGQQ9BRB3 760 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 PTDSS2Q9BVG9 487 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 ANKRD10Q9NXR5 420 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 BAIAP2Q9UQB8 552 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF337Q9Y3M9 751 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 CDH10Q9Y6N8 788 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms