RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZNF239Q16600 458 aaKnown RBP20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 ELOA3BQ3SY89 546 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 SPATS1Q496A3 300 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 ATG4DQ86TL0 474 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 LIX1LQ8IVB5 337 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 DEFB107AQ8IZN7 70 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 GCNT2Q8N0V5 402 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 SLC43A2Q8N370 569 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 ELOA3Q8NG57 546 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 SLC47A1Q96FL8 570 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 LRRC46Q96FV0 321 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 SRXN1Q9BYN0 137 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 OR11A1Q9GZK7 315 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 SH3GLB1Q9Y371 365 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 A0A1B0GWA3 101 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 DNPH1O43598 174 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 ENPP1P22413 925 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 HTR2AP28223 471 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 MYBPHQ13203 477 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 RNPS1Q15287 305 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 CDSNQ15517 529 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 ALG10BQ5I7T1 473 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 FCRLAQ7L513 359 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 OR6T1Q8NGN1 323 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 VANGL1Q8TAA9 524 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 STK35Q8TDR2 534 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 ROBO4Q8WZ75 1007 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 GMPPAQ96IJ6 420 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 TPD52L3Q96J77 140 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 ARL5BQ96KC2 179 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 UCK2Q9BZX2 261 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 PIGMQ9H3S5 423 aa20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 GMPR2Q9P2T1 348 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-205ENST00000417137 NCOA6Q14686 2063 aaPredicted RBP20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 A0A1W2PNV4 684 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 PRKD3O94806 890 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 HSD17B1P14061 328 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 SLC35A1P78382 337 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 FOXF2Q12947 444 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 SWT1Q5T5J6 900 aaKnown RBP20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 ZNF613Q6PF04 617 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 C6orf89Q6UWU4 347 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 CNEP1R1Q8N9A8 125 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 RNF217Q8TC41 542 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 FAM162AQ96A26 154 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 WFDC6Q9BQY6 131 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 PRR14Q9BWN1 585 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 EMC9Q9Y3B6 208 aa20.66■□□□□ 0.9
SMARCB1-205ENST00000417137 DOPEY1Q5JWR5 2465 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 TPST2O60704 377 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 EIF1BO60739 113 aaKnown RBP20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 GGT1P19440 569 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 IDUAP35475 653 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 AGFG1P52594 562 aaKnown RBP20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 CTBP2P56545 445 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 OR2B6P58173 313 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 BNIP2Q12982 314 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 GLYATQ6IB77 296 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 C5orf46Q6UWT4 87 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 FAM214BQ7L5A3 538 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 CARM1Q86X55 608 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 ARHGAP24Q8N264 748 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 RNF148Q8N7C7 305 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 RBM15BQ8NDT2 890 aaKnown RBP20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 RNF128Q8TEB7 428 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 SLC38A4Q969I6 547 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 GP6Q9HCN6 339 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 RPS6KA6Q9UK32 745 aa20.65■□□□□ 0.9
SMARCB1-205ENST00000417137 A0A0B4J2E0 115 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 A0A1B0GX12 115 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 NKX2-6A6NCS4 301 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 GPIP06744 558 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 T-ENOLP0DO92 83 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 ENTPD8Q5MY95 495 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 TACO1Q9BSH4 297 aaKnown RBP20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 NAA11Q9BSU3 229 aaPredicted RBP20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 TAPBPLQ9BX59 468 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 POLR2J2Q9GZM3 115 aaKnown RBP20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 PCDHAC1Q9H158 963 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 POLR2J3Q9H1A7 115 aaKnown RBP20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 CD300AQ9UGN4 299 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 EGFL7Q9UHF1 273 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 PACSIN3Q9UKS6 424 aa20.64■□□□□ 0.89
SMARCB1-205ENST00000417137 USP9YO00507 2555 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 ARHGAP21Q5T5U3 1957 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 ZC3H12DA2A288 527 aaKnown RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 CPSF4LA6NMK7 179 aaKnown RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 TMEM229AB2RXF0 380 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 EEF1E1-BLOC1S5C9J1V9 151 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 EEF1E1O43324 174 aaKnown RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 SS18L1O75177 396 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 TNFSF13O75888 250 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 AHSA1O95433 338 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 ZNF682O95780 498 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 SERPINA1P01009 418 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 TCN1P20061 433 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 CPOXP36551 454 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 KIR2DL2P43627 348 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 ASCL1P50553 236 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 NPTX1Q15818 432 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms