RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TESCQ96BS2 214 aa13.02□□□□□ -0.33
RPS28-201ENST00000417088 NEURL3Q96EH8 262 aa13.02□□□□□ -0.33
RPS28-201ENST00000417088 C1QTNF6Q9BXI9 259 aa13.02□□□□□ -0.33
RPS28-201ENST00000417088 C20orf27Q9GZN8 174 aa13.02□□□□□ -0.33
RPS28-201ENST00000417088 TMEM181Q9P2C4 612 aa13.02□□□□□ -0.33
RPS28-201ENST00000417088 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.33
RPS28-201ENST00000417088 FAM234BA2RU67 622 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 WDR91A4D1P6 747 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 M0R1B8 84 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 PDLIM1O00151 329 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 AP3D1O14617 1153 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 IFNA2P01563 188 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 MYZAPP0CAP1 466 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 IMPDH2P12268 514 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 MAGEA8P43361 318 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 KHKP50053 298 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 FABP6P51161 128 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 ABCE1P61221 599 aaKnown RBP13.01□□□□□ -0.33
RPS28-201ENST00000417088 GPAT3Q53EU6 434 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 SPANXN4Q5MJ08 99 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 OR7E24Q6IFN5 339 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 CLEC2AQ6UVW9 174 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 FBXL14Q8N1E6 418 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 WDR31Q8NA23 367 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 VPS37AQ8NEZ2 397 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 HTRA1Q92743 480 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 SLC35A5Q9BS91 424 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
RPS28-201ENST00000417088 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 RAP2CQ9Y3L5 183 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 FLVCR1Q9Y5Y0 555 aa13.01□□□□□ -0.33
RPS28-201ENST00000417088 TMED7-TICAM2A0A0A6YYA0 188 aa13□□□□□ -0.33
RPS28-201ENST00000417088 ELOA3DA6NLF2 546 aaPredicted RBP13□□□□□ -0.33
RPS28-201ENST00000417088 RNF212BA8MTL3 300 aa13□□□□□ -0.33
RPS28-201ENST00000417088 HMGN4O00479 90 aa13□□□□□ -0.33
RPS28-201ENST00000417088 CHI3L1P36222 383 aaPredicted RBP13□□□□□ -0.33
RPS28-201ENST00000417088 HTR3AP46098 478 aa13□□□□□ -0.33
RPS28-201ENST00000417088 DSCR9P59020 149 aa13□□□□□ -0.33
RPS28-201ENST00000417088 LOXL1Q08397 574 aaPredicted RBP13□□□□□ -0.33
RPS28-201ENST00000417088 RAB35Q15286 201 aa13□□□□□ -0.33
RPS28-201ENST00000417088 CHI3L2Q15782 390 aa13□□□□□ -0.33
RPS28-201ENST00000417088 TMEM249Q2WGJ8 235 aa13□□□□□ -0.33
RPS28-201ENST00000417088 ELOA3BQ3SY89 546 aa13□□□□□ -0.33
RPS28-201ENST00000417088 CHRFAM7AQ494W8 412 aa13□□□□□ -0.33
RPS28-201ENST00000417088 C6orf52Q5T4I8 152 aa13□□□□□ -0.33
RPS28-201ENST00000417088 C9orf135Q5VTT2 229 aa13□□□□□ -0.33
RPS28-201ENST00000417088 ZNF544Q6NX49 715 aa13□□□□□ -0.33
RPS28-201ENST00000417088 CASP12Q6UXS9 341 aa13□□□□□ -0.33
RPS28-201ENST00000417088 DEPDC4Q8N2C3 294 aa13□□□□□ -0.33
RPS28-201ENST00000417088 ANKFN1Q8N957 763 aa13□□□□□ -0.33
RPS28-201ENST00000417088 ELOA3Q8NG57 546 aa13□□□□□ -0.33
RPS28-201ENST00000417088 AENQ8WTP8 325 aaKnown RBP13□□□□□ -0.33
RPS28-201ENST00000417088 TNFRSF13CQ96RJ3 184 aa13□□□□□ -0.33
RPS28-201ENST00000417088 SORT1Q99523 831 aa13□□□□□ -0.33
RPS28-201ENST00000417088 INPP5KQ9BT40 448 aa13□□□□□ -0.33
RPS28-201ENST00000417088 TMEM109Q9BVC6 243 aa13□□□□□ -0.33
RPS28-201ENST00000417088 AMBRA1Q9C0C7 1298 aa13□□□□□ -0.33
RPS28-201ENST00000417088 SLC38A1Q9H2H9 487 aa13□□□□□ -0.33
RPS28-201ENST00000417088 SLC7A10Q9NS82 523 aa13□□□□□ -0.33
RPS28-201ENST00000417088 DCTN4Q9UJW0 460 aa13□□□□□ -0.33
RPS28-201ENST00000417088 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
RPS28-201ENST00000417088 TMED7Q9Y3B3 224 aa13□□□□□ -0.33
RPS28-201ENST00000417088 TMEM72A0PK05 275 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 AGAP5A6NIR3 686 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 H7C417 338 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 ZNF208O43345 1280 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 EIF1BO60739 113 aaKnown RBP12.99□□□□□ -0.33
RPS28-201ENST00000417088 LBPP18428 481 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 TACR3P29371 465 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 S100A3P33764 101 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 RPL14P50914 215 aaKnown RBP12.99□□□□□ -0.33
RPS28-201ENST00000417088 POLR2HP52434 150 aaKnown RBP12.99□□□□□ -0.33
RPS28-201ENST00000417088 CLNS1AP54105 237 aaKnown RBP12.99□□□□□ -0.33
RPS28-201ENST00000417088 SLC35A1P78382 337 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 HPCAP84074 193 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 SLC25A3Q00325 362 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 SLC17A1Q14916 467 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 SYPL1Q16563 259 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 DPY19L1Q2PZI1 675 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 FAM174BQ3ZCQ3 159 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 TSPO2Q5TGU0 170 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 RNF130Q86XS8 419 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 PHC2Q8IXK0 858 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 CMIPQ8IY22 773 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 ZNF525Q8N782 197 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 PMM1Q92871 262 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 DDIT4LQ96D03 193 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 TEX37Q96LM6 180 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 CCDC115Q96NT0 180 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 TRNT1Q96Q11 434 aaKnown RBP12.99□□□□□ -0.33
RPS28-201ENST00000417088 NAA11Q9BSU3 229 aaPredicted RBP12.99□□□□□ -0.33
RPS28-201ENST00000417088 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 HEATR1Q9H583 2144 aaKnown RBP12.99□□□□□ -0.33
RPS28-201ENST00000417088 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 PARPBPQ9NWS1 579 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 UPB1Q9UBR1 384 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 BTNL2Q9UIR0 455 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 SLC9A8Q9Y2E8 581 aa12.99□□□□□ -0.33
RPS28-201ENST00000417088 ATP23Q9Y6H3 246 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms