RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 UQCRC2P22695 453 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 IDH2P48735 452 aaKnown RBP21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 KCNJ10P78508 379 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 LOXL1Q08397 574 aaPredicted RBP21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 SMU1Q2TAY7 513 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 KLHL17Q6TDP4 642 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 FBXL14Q8N1E6 418 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 ZHX1-C8orf76Q96EF9 292 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 AMBRA1Q9C0C7 1298 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 EXOSC3Q9NQT5 275 aaKnown RBP21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 SLC7A10Q9NS82 523 aa21.37■■□□□ 1.01
AC005540.1-201ENST00000413911 PRSS51A0A1B0GVH4 220 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 TMEM72A0PK05 275 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 DNPH1O43598 174 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 LY6HO94772 140 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 CLK1P49759 484 aaKnown RBP21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 VLDLRP98155 873 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 RAB35Q15286 201 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 ATAD3BQ5T9A4 648 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 OIT3Q8WWZ8 545 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 NEURL3Q96EH8 262 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 INPP5KQ9BT40 448 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 DPY30Q9C005 99 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 TMEM181Q9P2C4 612 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 OSGIN1Q9UJX0 560 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 PCDHGB4Q9UN71 923 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 TRAPPC4Q9Y296 219 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 FLVCR1Q9Y5Y0 555 aa21.36■■□□□ 1.01
AC005540.1-201ENST00000413911 TMED7-TICAM2A0A0A6YYA0 188 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 ZC3H12DA2A288 527 aaKnown RBP21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 H7C417 338 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 HMGN4O00479 90 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 AGR2O95994 175 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 FAM157CP0CG43 387 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 DSCR9P59020 149 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 CASP8Q14790 479 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 SPANXN4Q5MJ08 99 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 TSPO2Q5TGU0 170 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 OR7E24Q6IFN5 339 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 CASP12Q6UXS9 341 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 NUDCD3Q8IVD9 361 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 ARFGAP2Q8N6H7 521 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 ANKFN1Q8N957 763 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 C10orf105Q8TEF2 133 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 TMED7Q9Y3B3 224 aa21.35■■□□□ 1.01
AC005540.1-201ENST00000413911 WDR91A4D1P6 747 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 PHF1O43189 567 aaPredicted RBP21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 MAGEA8P43361 318 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 SYPL1Q16563 259 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 GPAT3Q53EU6 434 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 ZNF544Q6NX49 715 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 TMEM158Q8WZ71 300 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 TESCQ96BS2 214 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 ZIM3Q96PE6 472 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 SLC38A1Q9H2H9 487 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 SLC17A5Q9NRA2 495 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 MARCOQ9UEW3 520 aaPredicted RBP21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 ATP23Q9Y6H3 246 aa21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 HEATR1Q9H583 2144 aaKnown RBP21.34■■□□□ 1.01
AC005540.1-201ENST00000413911 CHRM4P08173 479 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 KHKP50053 298 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 VSNL1P62760 191 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 SLC17A1Q14916 467 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 ANXA8L1Q5VT79 327 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 FAM168AQ92567 244 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 TEX37Q96LM6 180 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 SLC35A5Q9BS91 424 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 DCTN4Q9UJW0 460 aa21.33■■□□□ 1.01
AC005540.1-201ENST00000413911 IGHV4-31P0DP07 118 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 SLC25A16P16260 332 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 FKBP2P26885 142 aaKnown RBP21.32■■□□□ 1
AC005540.1-201ENST00000413911 TACR3P29371 465 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 IFFO1Q0D2I5 559 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 MST1LQ2TV78 715 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 RNF130Q86XS8 419 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 DEPDC4Q8N2C3 294 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 ARIH2OSQ8N7S6 290 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 ZIC4Q8N9L1 334 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 KCNK17Q96T54 332 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 SORT1Q99523 831 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 ROPN1BQ9BZX4 212 aaPredicted RBP21.32■■□□□ 1
AC005540.1-201ENST00000413911 ROPN1Q9HAT0 212 aaPredicted RBP21.32■■□□□ 1
AC005540.1-201ENST00000413911 CDC42EP3Q9UKI2 254 aa21.32■■□□□ 1
AC005540.1-201ENST00000413911 ANK2Q01484 3957 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 AGAP5A6NIR3 686 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 ATP6V1G2-DDX39BF2Z307 99 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 ZNF208O43345 1280 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 SERPINE1P05121 402 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 CHI3L1P36222 383 aaPredicted RBP21.31■■□□□ 1
AC005540.1-201ENST00000413911 POLR2HP52434 150 aaKnown RBP21.31■■□□□ 1
AC005540.1-201ENST00000413911 EFNA4P52798 201 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 ABCE1P61221 599 aaKnown RBP21.31■■□□□ 1
AC005540.1-201ENST00000413911 SLC35A1P78382 337 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 CHI3L2Q15782 390 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 C1orf162Q8NEQ5 155 aaPredicted RBP21.31■■□□□ 1
AC005540.1-201ENST00000413911 UPB1Q9UBR1 384 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 SLC9A8Q9Y2E8 581 aa21.31■■□□□ 1
AC005540.1-201ENST00000413911 ARFGEF3Q5TH69 2177 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms