RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 NTMQ9P121 344 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 MRPS2Q9Y399 296 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 OR2W5A6NFC9 320 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 LAG3P18627 525 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 RAB28P51157 221 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 HNRNPA1L2Q32P51 320 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 HEPHL1Q6MZM0 1159 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 RD3Q7Z3Z2 195 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 WDFY3Q8IZQ1 3526 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 LNX2Q8N448 690 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 TMEM52Q8NDY8 209 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 OR6K6Q8NGW6 343 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 OR56B4Q8NH76 319 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 REG4Q9BYZ8 158 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 MED17Q9NVC6 651 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 MRPL39Q9NYK5 338 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 FBXL2Q9UKC9 423 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 ADAM29Q9UKF5 820 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 TRAPPC13A5PLN9 417 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 FAM86C2PA6NEL3 165 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 LYPD3O95274 346 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 LAMP2P13473 410 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 MTSS1LQ765P7 747 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 UBE2Q1Q7Z7E8 422 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 RELL2Q8NC24 303 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 OR4D10Q8NGI6 311 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 SFXN5Q8TD22 340 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 BRIX1Q8TDN6 353 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 ST8SIA4Q92187 359 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 HGDQ93099 445 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 NOX3Q9HBY0 568 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 POMT2Q9UKY4 750 aa13.44□□□□□ -0.26
SEMA3F-202ENST00000413852 RIIAD1A6NNX1 92 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 P2RX6O15547 441 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 NT5EP21589 574 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 ANXA11P50995 505 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 NRG3P56975 720 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 DPTQ07507 201 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 GPAT4Q86UL3 456 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 OR4N2Q8NGD1 307 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 STK35Q8TDR2 534 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 SNX33Q8WV41 574 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 MTHFD2LQ9H903 347 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 STARD5Q9NSY2 213 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 FLRT3Q9NZU0 649 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 PCDHGA9Q9Y5G4 932 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 L7N2F9 121 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 IGF2P01344 180 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 ADH1AP07327 375 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 NANOS3P60323 173 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 PSMA6P60900 246 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 RUNX2Q13950 521 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 FAM199XQ6PEV8 388 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 C3P1Q6ZMU1 363 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 ST8SIA2Q92186 375 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 TOE1Q96GM8 510 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 C10orf90Q96M02 699 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 NMNAT3Q96T66 252 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 GINS4Q9BRT9 223 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 CA5BQ9Y2D0 317 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 IER3IP1Q9Y5U9 82 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 FXYD6-FXYD2A0A087WZ82 144 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 hCG_1807616A0A1W2PRN6 198 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 TBC1D3BA6NDS4 549 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 H0YC42 278 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 RAD1O60671 282 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 PPM1BO75688 479 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 PSMB1P20618 241 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 SLC2A5P22732 501 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 EMDP50402 254 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 GRM7Q14831 915 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 ARHGAP19Q14CB8 494 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 VN1R4Q7Z5H5 301 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 GPALPP1Q8IXQ4 340 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 SMIM4Q8WVI0 70 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 KCTD12Q96CX2 325 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 FXYD6Q9H0Q3 95 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 LIN7BQ9HAP6 207 aa13.43□□□□□ -0.26
SEMA3F-202ENST00000413852 SLC22A31A6NKX4 558 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 CT62P0C5K7 136 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 AK4P27144 223 aaPredicted RBP13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 SMARCD2Q92925 531 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 MOKQ9UQ07 419 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 A0A1B0GVI7 797 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 MCIDASD6RGH6 385 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 FBXO45P0C2W1 286 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 SHC2P98077 582 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 BDH1Q02338 343 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 IRF4Q15306 451 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 HSD17B12Q53GQ0 312 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 GARNL3Q5VVW2 1013 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 DCAF12L2Q5VW00 463 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 ARSKQ6UWY0 536 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 ASPGQ86U10 573 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 TPRA1Q86W33 373 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 IQCF2Q8IXL9 164 aa13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 LRRC25Q8N386 305 aaPredicted RBP13.42□□□□□ -0.26
SEMA3F-202ENST00000413852 MEIOBQ8N635 442 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms